Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
2353	GCCTGTGGACACGGCCACCTGTCGACACGGCCACCTGTCGACACGTCC	Design primers
20606	CTCTGTCGCCTTGTCG-CCGCGTCGCCTTGTCG-CTCCGTCGCCTTGTCG-CTCCGTCGCCTTGTCG	Design primers
35957	TGTCGACTCGTCGCCATGGCGACTCATCCCCATGGCGACTCGTCCACA	Design primers
50452	TGGCCACCGAGCCCGCCG-GACCCACCGAGCCCGCCG-GACCCACCGAGCCCGCCG-GACCCACCGAGCCCGCCG	Design primers
52262	TCGCCGTCGCCTTCGGCGTCGGCG	Design primers
63708	CA-CG-CG-CG-CA-CC-CG-CG-CC-CA-CA-CC-CG-CG-CG	Design primers
93125	GGGCGGCGCGGGCCGGGGCCCGGCG	Design primers
115323	CG-GA-TC-CG-CG-CA-GG-TC-CG-CG-CG-GG-TG-CG-CG	Design primers
118485	CGCGGGGTCGCGGGGCCGTGGGGT	Design primers
133242	CCGAGCCCGAACCCGAACCCGAGG	Design primers
133985	CGA-GGA-GGA-GGA-AGA-GGA-GGA-GGA	Design primers
211201	GCACCGACACCGACACCGGCTCCG	Design primers
216585	CTGGGCGAGCTGCGCGAGCTGGGCGTG	Design primers
226812	GCGCCGCCGCCGGGGCCGGTGCCG	Design primers
233863	CACCGCGGCCGTT-GACCGCGGCCGTT-GACCGCGGCCGGT	Design primers
284180	CCGCCGAGACCGCTGAGACCACCGAGA	Design primers
299954	GGCGGCGACGGCGTCGGCGGAGGC	Design primers
300344	CACGGCCGCGGCCACGCCGACGGC	Design primers
304132	CGTCGCGGCCCTGCCGTTCGTCGCGGCCCTGCCCTTCGCTGCGGCCCTCCCGTT	Design primers
312564	GAGGGCGAGGACGGCGAGGAGGTCGAG	Design primers
313304	CGG-TGG-CGG-CGG-CGG-TGG-TGG-TGG	Design primers
319838	GACGAGGAGGGCGAGGAGTACGAGGAG	Design primers
326735	CGCCTCCGCCACCGCCGCCGTCTC	Design primers
338467	CCGCCGCCGCCCGCGCCGCCGCCG	Design primers
362783	CGGCTCCGGCTGAGGCTCCGGTTC	Design primers
363874	TACGAGGAGTACGACGAGTACGGGGAGTACGACGAG	Design primers
364461	CGGCA-CGCCC-CGCCC-CGCCC-CGCCC-CGCCC	Design primers
380747	CCGCGGCCGAGGCCGCCGCCGAGG	Design primers
395952	CCATCGCCACCGCCATCCGCATCG	Design primers
400281	CGTCGTCGTGGTCGCCGTCGCCGT	Design primers
430224	GGCCTTGGACTTGGCCTCGGCCTC	Design primers
434761	GGCTGG-TGCTGG-TGCTGG-TGCTGG	Design primers
441606	GGTGCG-GGGGCG-GGGGCG-GGGGCG	Design primers
503048	CGGCGGCGTCGGCGACGGCGGCGC	Design primers
522504	ACCACGTCCACGAACACGTCCACG	Design primers
525171	CGGAGGCGGATGGGGAGGCGGTGG	Design primers
525310	GGTGGCCTC-GCCAGCCTC-GCCAGCCTC-GCCAGCCTC-GCCAGCCTC-GCCAGCCTC-GCCAGCCTC-GCCAGCCTC	Design primers
531103	GAGCCGCCGCGCCGCCGAGACGCC	Design primers
561362	GCCCTGCCCCTGGCACTGGCCGTGACCCTG	Design primers
561460	GCCCTC-GCCCTC-CCCCTC-CCCCTC	Design primers
581362	GCATCGGCGTCGGCACCGTCATCG	Design primers
621511	CGCCGGACCCGGACGAGC-CCACGGACCCGGATGAGC-CCACGGACCCGGATGAGC-CCACGGATCCGGACGAGC-CCACGGACCCGGACGAGC	Design primers
621604	CCGACCCCGACGAGACGG-ACGACCCCGACGAGACGG-ACGACCCCGACGAGCCCG	Design primers
638306	TCCTCGGCGTGGTCGTGGCCCTCCTCGCCGTGGCCGTGCTCCTCCTCGCCGTGGCCGTGCTCCTCCTCGGCGTGCTCGTCACCT	Design primers
642281	GCCGTG-CCCGTG-CCCGTG-GTCGTG	Design primers
679453	GCCCGC-GACCGC-GACCGC-ACCCGC	Design primers
681471	GCCCGGGGCGGCCTGGAGCGGCCTGGGGCG	Design primers
761777	CCACTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG-TTGCTGCGG	Design primers
765786	CGCCACCCCCACCGCCCCCGCCGCCGCCAG	Design primers
769538	GCGCAGCGAAGCGCCCCGCACCGCA	Design primers
781051	CGACCCGCCCGACCCGGCGGACCCGCC	Design primers
824429	CGCCGCCGCCGCCCTCGCCGCCGCTGCCGCCGCCGA	Design primers
832457	ACGGCGGCGGTGGCGGCGGCCGTGAGGGCGGCGGCG	Design primers
851002	GCTTCGGCTTCCGCTGCGGCTTCC	Design primers
854573	CCTCGGCCCCGGCCTCGGCCTCGG	Design primers
856328	CTCAGCCGCTCAGCCCTTCAGCCGCTCAACCG	Design primers
885121	GCCGTC-GCCGAC-GCCGAC-GCCGTC	Design primers
893288	CGCCGCCACCGCCGCCGTTGCCGCCGCCGTCACCGC	Design primers
896653	GGCCGACCGCCTGGCCGAGCACCTGGCCGACCACGT	Design primers
922303	ACACCACCCCCCACCACCCCCCACCACACG	Design primers
968613	CGGGGACGGGGGCGAGGACGGTGA	Design primers
976310	CAGGAGGAGGAGCTGGAGCAGGGG	Design primers
1013630	GGGACGGGAACGGGGACGGGGGCG	Design primers
1032038	CGGCCCAGGCCCCGGCCTCCGCCC	Design primers
1038917	TCCCGGTTCCGGTCCGGGGCCCGG	Design primers
1052186	CAGGTCCGAGCGGTCCTAGGTCCGAGCGGTGCTGGGTCCGAGCGGTGC	Design primers
1052235	GGGTTCGAGCGGTGCT-GGGTTCGAGCGGTGCT-GGGTTCGAGCGGTGCT-GGGTTCGAGCGGTGCT-GGGTTCGAGCGGTGCT-GGGTTCGAGCGGTGCT-GGGTTCGAGCGGTCCT	Design primers
1088716	CCCCGCCCCCGCTCCCGCCCCTGC	Design primers
1092605	ACACCGACGCCGACCCCGCCACCG	Design primers
1146315	GCGCGGGTGCGGGCGCAGGCGCAG	Design primers
1148844	CTCCGCCCCCCGCCCTCCGTCCGCCGCC	Design primers
1159035	CGGGCT-CGGGCT-CGGCCT-CGGCCT	Design primers
1159451	TCGGGCTCGGGGGCGGGCTCCGGCTCGGGC	Design primers
1163800	CGGCCAGGTCGGCCAGGCCGTCCAGGT	Design primers
1164381	CCGCCTCCACCTCCTCCTCCGCGT	Design primers
1164590	GGGTCCGCGTCCGGGTCGGGCTCC	Design primers
1188272	CCGGGGGTGTACGGCGGTGTCCCCGGGTGT	Design primers
1219886	CCGGTGTCCGTGCCGGTCTCCGCGTCGGTGTCCGGG	Design primers
1222678	ACTCGG-CCCCGG-ACCCGG-ACCCGG-ACCCGG-TCCCGG	Design primers
1231489	CGGGTGCGGGCGCGGGTGCGGGTC	Design primers
1232664	TGCCGTCGTCGCCGCCCCCGTCGTCACCGCCGCCGTCATCGCCTCCGCCGTCGTCGCCAC	Design primers
1234103	TCCGGGGTCTCCGGAGTCTCTGGGGTC	Design primers
1245803	GCGGCGGCGGTGACGGCGGCGGCG	Design primers
1254320	GGCTCCGGGGAGGTCTTCGGGGAGGGCTCCGGCGGG	Design primers
1315695	CCTTCGACGGCCCCCCGACGGCCCCCCGACGGC	Design primers
1326519	CGGCGCCGCCTTCCC-GGATGCCGCCTTCCC-GGATGCCGCCTTCCC-GGACGCCGCCTTCCC	Design primers
1389750	CGAGGG-CGAGGG-CGGGGG-CGAGGA	Design primers
1449399	CCTCGCTGGCCTCGGTGGTCTCGCTGG	Design primers
1461899	CATGCCGCCCATGCCTCCCATGCCGCC	Design primers
1463640	GGC-GGC-GGG-GGC-GGT-GGC-GGC-GGC-GGG-GGC	Design primers
1464986	GAACCACCC-GAGCCGCCC-GAGCCGCCC-GAGCCGCCC-GAGCCGCCC-GAGCCACCC	Design primers
1465461	CGT-CGC-CCT-CCT-CGT-CGT-CCT-CGT-CTC-CCT-CGC-CGT-CCT-CCT-CGT-CGT-CCT-CGT-CGT-CGT-CCT-CGT-CGT-CGT-CCT-CGT-CGT-CGT-CCT-CGT-CGT-CCT-CGT-CGT-CCT	Design primers
1465585	GGTGTCCTC-GGTGTCCTC-GGTGTCCTC	Design primers
1479908	GCCGCTGCC-ACCGCTGCC-ACCGCTGCC	Design primers
1480089	TCG-TTC-TCC-TCC-TCG-GTG-TCC-TCC-TCC-TTC-TTC-TCC	Design primers
1486057	CTGGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT	Design primers
1494514	GTGTCGCTGTCGGAGTCGCTGTCG	Design primers
1498379	GAGTCCGTGTCCGAATCGGTGTCCGAGTCCGAGTCG	Design primers
1504301	GCGGCGGTGGCGTCGGTGGCGGCGGTG	Design primers
1516025	GGTGTGCCCTCCGGTGCGGTCCCCTCCGGTGGTGTGCCCTCCGGT	Design primers
1517511	TGTCGCTGTCGTAGTCGCTGTCGT	Design primers
1521791	TCGGGCGGCTCGGGGGGCTCCGGCGGC	Design primers
1529345	GCGGCCGCTGCCGCCGCCGAGGCC	Design primers
1530303	CTGAGTCGACCGAGTCGACCGAGTCGA	Design primers
1530457	CTTCTGGGACGCCGACGTCTGGAACACCGACTTCTGGGAGACCGA	Design primers
1569018	GGCCGCGGATCGGCCTCGCGCGGCGGTTCGGCCTCGCGCGGCGGGTCGGCCTCG	Design primers
1586331	GCCGTGCA-CCCGTGCA-CCCGTGCA-CCCGTGCA	Design primers
1590740	GGCACCGACGCGGGCGGTATCGACACGGGCGGCACCGAGGCCGAC	Design primers
1605146	GGAGCCCGGTCC-CGAGCCCGGTCC-CGAACCCGGTCC	Design primers
1608190	GGGCCTGAGGGTACGGAGCCTGAGGATACGGAGCTTGCGGGTACG	Design primers
1630448	GCGGCC-CCGGCC-GCGGCC-GGGGCC	Design primers
1640852	CCGCCGCCGTCTGACCACCGCCGTCTGACCGTCGCCGTCCGACTGCCGCCGTCCGA	Design primers
1643893	CGCCGGGCCGCGCCCGGCTGGGCCGGGACG	Design primers
1677980	ACCGACCCCACCGATCCCACCGACCCG	Design primers
1683628	CCGCCCCCGCACTCGGTCCGGCCCCGGTCCGCACTCGGTCCGGCCCCGGTCCGCACTCGGTCCGGC	Design primers
1695102	CGCCGCGGCGCGCCTGGCCGCGCTGCGCCGCACCG	Design primers
1725735	CCAGCAGCAGCACCCGCACCACCA	Design primers
1747445	CGCCGCCGTCTCCGCCGTCCCCGCCGT	Design primers
1769964	CCTGCACCTGCGCCCGCACCTGCG	Design primers
1784329	CGCCGTCGCCGCCGTCGGCGCGGTCGC	Design primers
1808805	ACCGCG-ACCGCG-CCCGCG-ACCGTG	Design primers
1813079	CGGGCCCGGGACCTGGCCCGGTCC	Design primers
1813919	CGGCGGCGACGACGGCCTCGGCGAAGACGGCGTCGGCGCCGTCGG	Design primers
1820695	CCTCGTCCTTGTCCTCGTTCTCGT	Design primers
1839536	GCAACCC-GTAACCC-GTAACCC-GCAACCC	Design primers
1846743	GCCCC-GCCGC-ACCCC-ACCCC-GCCCC	Design primers
1846852	GCCGA-CCCGA-CCCGA-CCCGA-CCCGA	Design primers
1849748	ACCGA-CCCAC-CCCGA-CCCAA-CCCAC-CCCGG-CCCAC-CCCAC-CCCGA-CCCAA-CCCAC-CCCGG-CCCAC-CCCAC-CCCGA	Design primers
1849854	CCCGCCGCGCCCCACCCCGCCCCTCCCGGC	Design primers
1862548	TCCCGA-GCCCGA-GCCCGA-GCCCGA	Design primers
1877402	GCGGGCTCGGGCTCGGGCGCGGAC	Design primers
1928184	AACGACGGACAGCGACGAACGACGACGGAGAACGAGGGAG	Design primers
1976665	CCCGACCCCGAACGCGACCGCGAC	Design primers
1987845	CGACGCCGCCTCCGCCGACCCAGCTTCCGCCGACAGCGCCTCCCC	Design primers
1990918	CGGGGCGGCCGCGGCGGCCGTGGCGGC	Design primers
1993317	CCCCCGACGCGGTCCCGGCGTGGCCCCGTCGCGGTCCCGGTGTGGCCCCGGCATGGTCCCGGCGTG	Design primers
1999265	GGTGGTCGTGGTGGGGGTGGTGGA	Design primers
2005386	GGCCCTGGCCGTGGCGCTGGCGCT	Design primers
2006311	GTCGGTT-GAGCGGT-GAGCGGT-GAGCGGT-GAGCGGT-GAGCGGT-GAGCGGT-GAGCGGT-GAGCGGT	Design primers
2041434	TCG-CCG-CCG-CCG-TCG-ACG-TCG-TCG	Design primers
2054520	GGGGGTCGGGGTCGGGGTGGGGGAGGGCGT	Design primers
2055515	GGGCCGCGCGGGGCGGCGAGGGGCGGCGAGGGGCCGGGGG	Design primers
2101449	CCTTCGCCTACGCCTTCCGCTTCG	Design primers
2175432	CGCCCCCGCCCTCGACCCCGCCCG	Design primers
2211196	TGCGACCCGCCGACCCCGTCCGACCCGCCGTCCCCGTCCGACCCACCGTCCCCG	Design primers
2213101	CGTGGCCGTGCCCGTGGGCCTGGC	Design primers
2220940	CGCCGGGAA-CGCCGGGAA-CGCCGGGCA-CGCCGCGAA	Design primers
2258849	CGACGACGACGGCGCCGACGAGGA	Design primers
2274173	AACCGGACCGATCCGCGCCCGTCCGCACCGGTCCGCGCCCGTCCGCACCGGTCCGCGCCC	Design primers
2293087	GTGGCAGACACGGCACGGCGGCAGACACGGCACGGCGGCAGACGCGGCCCG	Design primers
2303794	CGCCGT-GGCCGT-GGCCGT-GGCCGT	Design primers
2330408	GGCCGTGCCGGGTCGGCCCGGTCCG	Design primers
2330775	GGCCAGGGCCCGGGCCAGGGCCAC	Design primers
2360414	CACCGCCAACGCCACCGTCACCGG	Design primers
2382471	GGCTGGGGATGGGTCTGGTGCTGG	Design primers
2386196	GCCGGTGCCGTTGTCGGTGACGGT	Design primers
2436044	GCGCGGGCGCGCGCGCAGGCGCGC	Design primers
2455776	CTCGCC-CTGGCC-CTGGCC-CTGGCC	Design primers
2559312	AGCCGATGAGC-AGCCGATGAGC-AGCGGTTGAGC	Design primers
2565398	GCGGTGGCCGTGGCGGCGGCCGTGGCGGGG	Design primers
2588420	CTGGCCCTGGCGCTGGGCCTGCCC	Design primers
2597012	CCCGGCCCGGGCCGCGGCCCCGCC	Design primers
2611371	CCCCCGACCCCGCGCCCGCCCACG	Design primers
2617543	ACCTGGCCCACCTGCCCCACCTGGCCC	Design primers
2636720	GTTGGCGCCCAGGGTGGCGGCCAGGTCGTCGCCCAG	Design primers
2652329	ATCACCCCCTCCATCACCCCCGACATGATCCCCTCC	Design primers
2654916	GCGTCGACCAGGTCGGCGTCGCGCAGGTCCGCCTCGGTCAGGTCG	Design primers
2656156	GGGCAGGGCGGGGCCGGTCAGGGCG	Design primers
2688646	CGCCCCGGAGCCCCGGGGCCCCGG	Design primers
2696369	TGGCGGTGGCGATCGCGGCGGCGG	Design primers
2706229	CTCCG-CCCCG-CCCCG-CCCCG-CCCCG	Design primers
2718960	CGACCG-CGACCG-CGGCCG-CGACCC	Design primers
2727811	CGGGGATGGGGACGAGGACGGGGA	Design primers
2729125	GGCCCGGACCGACCCGGCAGACCAGGGCCGGACCGACCCAGTGGACCAGTCCCGGACCGACCCGGCAGGCCA	Design primers
2752502	GGCGGGAGCGGGGGTGGGGGCGGT	Design primers
2764517	CGGCGACGACGACGGCAACGGCGT	Design primers
2792718	CCCGTGACCGTGCTCGTGCGCGTG	Design primers
2792865	CCCGTGACCGTGCTCGTGCGCGTG	Design primers
2800768	CTC-CTC-CTC-TTC-CTC-TTC-TTC-CTC	Design primers
2805908	CCGCGGCCCCGGCCGCCGCCGCGG	Design primers
2839620	GAGCCCTCGGCCGGGCCCTCCGCCGAGGGCTCGGCC	Design primers
2855294	GGCCCTGGCCGTGACCCTGCCCCT	Design primers
2861765	CCGCCGCCCCCGCCTCCGCCGCCT	Design primers
2899997	GGGCTCCGGCTCCGGCTCCGGCTCCGGCTCGGGTTCCGGCTCCGGCTCCGGCTCGGGGTC	Design primers
2900911	CGGGGCTCTGGGTTGC-AGGGGCTCTGGGTTGC-AGGGGCACTGTGTTGC	Design primers
2906908	TCCGGG-TCCGGA-TCGGGG-TCGGGG-TCAGGG	Design primers
2907491	GGTGATGCGGGTGGTGCGGGTGGTGCG	Design primers
2918447	ACGGG-GCGGG-GCGGG-CCGGG-TCGGG	Design primers
2918622	TGGTTGCGGGTGGTGGCCGGAGGTAGCGGG	Design primers
2921123	CCGGCGACC-ACGGCGACC-ACGGCGACC	Design primers
2966027	CGGGAGCGGGTCGTTCCGGAGCGGACCGTTCCAGAGGGGGTCGTT	Design primers
2968147	TGGCAGTAGCAGTGGCAGTGGCAGTGCCAG	Design primers
2970655	ACTCCGACCCGGACCGACCTGCCCCGGCCCGGTCCGGACCGACCTGCCCCGGACCGATCCGGTCCGACCTGCCCC	Design primers
2971760	TGG-TGC-TGC-TGC-TGG-TGG-TGG-TGC	Design primers
2972537	GCCCTG-GCCCTG-GACCTG-GGCCTG	Design primers
2978029	GTGGGCGTGGTCGAGGGCGTCGGC	Design primers
2980929	GGGACCGGGACGGGAACCGGGGCC	Design primers
2980994	CTGTGGGGAGTCGGGCGGTGGGGAGTGGGACAGCGGGGAGCCGGG	Design primers
2999339	CGGGCCGCGCGGGCGGCGCGGGACGCG	Design primers
3007757	GCCGGGGACGGGGCCCGGGTCGGG	Design primers
3022073	GCGGGCGGGGCGGGCGGCGGGGGCGGG	Design primers
3036632	CGCCGCCGCCTCCGCCGTCTCCGC	Design primers
3046468	GCAACG-GCCACG-GCCACG-GCCACG	Design primers
3050310	CGGCGGCGCGGCGCCGCGGCGGAG	Design primers
3086212	GCC-GCC-GCC-CCC-GCC-ACC-GCC-GCC	Design primers
3086593	GCGCAGCACCCGCAGCACGCGCAGGACCCGCAGCAC	Design primers
3087801	GTCGGCGGCGACGGTGTCGGCGCCGGAGGTGTCGGCGCCGGAGGT	Design primers
3088315	CGGGGCCGGGACGGGGGCGGGGGC	Design primers
3107560	CCAGGCCCACGCCCAGGGCCAGGA	Design primers
3107658	CCGCTCCCGGCCGCCGCGCTGCCGTCCGCCCCGCTCCCGGCGGAG	Design primers
3125027	CCCGGGCG-CCCGGGCG-CCGGGGCG	Design primers
3127349	CCGCACTCCCCCGCACACGCCCGCACACCG	Design primers
3146433	TCTGGTGGTGGGCCTGGCGGTGGGACTGATGGTGGG	Design primers
3152982	CAGGCCCGCGCCGAGGCAGAACGGGCCCGCGAGGAGGCCGAACGGGCCCGCGCCGAGGCCGAG	Design primers
3171805	GCCCGACCCGGCCCCGGCCGGCGCG	Design primers
3180770	GGGGTCCGGGTCGGGATCGGGGCC	Design primers
3198176	GGCGACGGCCACGGCGACGGCGAG	Design primers
3208862	GAACGGGGCCGGACCGGGCCGGACGCGGCC	Design primers
3212293	GGCGGCCGCGGAGCCGGGGTGGCTGCGGAACCGGGCCGGTCGCGGAGCCAG	Design primers
3229645	GGGCCAGGTCCATGGCCAGGGCGA	Design primers
3231892	ACCGGGGTT-GCCGGGGTT-GCCGGGGTT	Design primers
3339091	GCGGGGCGGAGCCGGGCGCGGCGGG	Design primers
3353385	TGGAGGCGGGTCGTGTCGGGGGCGGGACGTGTGGGACGCGGGTCCTGT	Design primers
3355152	CCGTCGTCGTCGCCGTCGCCGTTGCCCTCG	Design primers
3355246	CGTCGCCGCCGCCGTTGCCGTCGTCGTCGCCGTCAC	Design primers
3355398	CCCGGGTCACCGGGGTCACCGGGGTCACCCGGGTCG	Design primers
3355439	ACCGGGGTCACCCGGGTCGGGGTCACCGGGACCGGGGTCACCCGG	Design primers
3355517	ACCGGGGTC-ACCGGGGTC-ACCGGGGCC	Design primers
3379371	GATGTCGAGGTCGATGCCGATGGC	Design primers
3391739	ACGAGCAGGAGCACGAACACCAGC	Design primers
3447068	CCGCGGTCGCGGCCCCGGCCGGGG	Design primers
3448843	GGCGTCGGCCTCGGCCTCGGGGTC	Design primers
3454652	CGAACGCTGGTCCGAGTCCGAGCGCTGGCCCGAGACCGAGCGCTGGCCCGAGAC	Design primers
3454980	GCGGCCGCGGTCCCGGCCGCCGCC	Design primers
3456187	GCCCCCGGGGGCCCCGGGCGTCCCCCCGGG	Design primers
3464619	CGCGCGGGAGCGCACGGGCGCGGACGGGAG	Design primers
3466065	CGA-CGA-GGA-CGA-GGA-CGA-GGA-CGA	Design primers
3480538	ACCGCCTCCGACCGCCGCCCCTCGCCTCCG	Design primers
3481799	CCTGGGCCTGGACCCGGGCCTGCG	Design primers
3483402	CCCCGCGGCCCCTCGGCCCCTCGG	Design primers
3513813	CCTCGGGCGGGTCGGTCGGGTCCGGGTCCGGGGGGTCGGTCGGGTCCGGGTCCGGCGGGTCGGTCGGGTCCG	Design primers
3549259	GCCCGCGGCCCCCGCCCCGCGGCGCGCG	Design primers
3608673	CGCCGCCGTCGCCGCCACCGCGGCCGCCGC	Design primers
3611968	GCGGACGGGGACTCGGACGGGGAC	Design primers
3636847	CGCACGGCCCCGCCCCGGCACGGCCCTGTCCCGACACGGCCCCGCCCC	Design primers
3672487	GACCAGGAGCAGGACCAGGGCCAG	Design primers
3672653	TCCTCGTACTCGTCCTCCTCCTCG	Design primers
3672883	GCG-GCC-GCC-GCC-GCG-GCG-GCG-GCC	Design primers
3673734	GCCGGAGGGGCCGGAAGGGCCGGAAGG	Design primers
3693712	TTGATGAGC-TTGATGAGC-TTGACGAGC	Design primers
3704492	GGCTCGGGCTCCGGCCCGGGGTCGGGCACG	Design primers
3709982	AGGTGCTGCTCGGTACTGCTGGGTGCTGCG	Design primers
3729443	GCCCGGCGGCCGGGCGGCCCGGCT	Design primers
3729521	CGGCGGAGGCGGCCGCGGCGGCGA	Design primers
3763387	GGAGGCGGAGGAGGCGGTGGGGGCGGAGGAGGCGGC	Design primers
3768922	TCGGTGCCGGCGCCCTCGGCGCCCGCACCCTCGGCACCGGAGCCC	Design primers
3771452	AGCGCGCCCGAGCCCGCGCGGGCGCGCCGGAGCGCGCACA	Design primers
3799668	CGGCGGCGGCGCCGGTGGCGGCGG	Design primers
3828347	CGGAGCCGGTGTGGGCGGACCCGGAGCAGGTGTGGGCGAGTCCGGAGCAGGTGTGGACAGTCC	Design primers
3831199	CTTCGC-CTTCGC-CTTCGC-CTTCGC-CTTCGC-CTTCGC-CTTCGC-CTTCGA	Design primers
3864997	GACGGCGGAGGCGGCGGAGACGACGGAGGCGGCGGA	Design primers
3894141	GTCCGTTGGGCCGTTGGGCCGTTG	Design primers
3906910	GCGCCGCACCGCGGCACGCCGGGCC	Design primers
3943215	GACCCCGGC-GACCCGGGC-GACCCGGGC-GACCCGGGC	Design primers
3954240	TCGGATGACACAGCGCCTCGGACGACACGGTGCCCCGTATGACACAGTGCC	Design primers
3961140	GAGCGG-GAGCGG-GAGCTG-GACCGG	Design primers
3965258	CCAGGACCATGAGCAGGACCAGGG	Design primers
3990992	GTCCCTTTCGTCCCTTTTGTCCCTTGC	Design primers
3997452	CCAGCCGCGCCGAGCCGCACCGAGCCGCAC	Design primers
4002583	CCACCG-CAACCG-CAACCG-CAACCG-CAACCG	Design primers
4007837	CAGGGTCGCGACCAGGGTGGCGGCCAGGATCGCGAA	Design primers
4016703	CGCGGGCAGCGCGGCCAGCGCGGGCGG	Design primers
4027396	GGCCGGG-GTCCGGG-GTCCGGG-GTCCGGG	Design primers
4028056	GGCAGGGTCAGGGGCAGGAGCAGG	Design primers
4032339	GCGGCTGCGCCTGCGGGTCCGGCT	Design primers
4041345	TCGTCGGACTCGGCGGACTCGTCGGCC	Design primers
4041495	CGGCGGCGACGGCGGCTGGGGCGG	Design primers
4065260	CTTGGCCTCGTCGGCCTTCGTCTCCTCGGCCTTGGCCTCGTCGGC	Design primers
4070340	CTTGGGCTTCTTGCGCTTCTTCGGCTT	Design primers
4117484	GCGGCCTCGGCCGCGTCCACGGCC	Design primers
4122430	CGGGCAGGCGGACAGGCGGGCGGG	Design primers
4138411	CACCAGGCGGCACCACACGGCCCCAGACGG	Design primers
4143722	GCCACCACCACCGCCACGGACACCGCCACC	Design primers
4179449	ACCGCA-CCCGCA-CCCGCA-CCCGCA-CCCGCA	Design primers
4214425	GCGGCCTCGGCCGCGGACGCGGGC	Design primers
4214674	AGGAGCAGCACCGCGTGGACCAGCACCGGGGAGAGCAGGACCGCG	Design primers
4220854	CCGTGGGCGGAGTCGGCGAGGCCGTGGGCGGGATCGGTGAGACCCTGGGCGGCGCCGGAGAGG	Design primers
4227303	GAGGAGCCGGAGGAACCGGAGGAACCG	Design primers
4227333	GAGCCCGGGGAGCCCGAGGAGCCCGGC	Design primers
4247703	TGGGGCCTC-CGGGGCCTC-CGGGGCCTC	Design primers
4260889	GCCCATA-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC	Design primers
4269861	AGCCGCCCGGAAGCCCCGCGGAAACCGCACGGA	Design primers
4290750	CCGGCACGGCCGGGCCCGCCCCGTC	Design primers
4295427	TGTCGGCGTAGTCGGCGTTGTAGGCGT	Design primers
4302379	CCGGGCGGGTCCGCGCGGGGTCAGGCGGGT	Design primers
4306257	GCCGCCGCCACCGCCGCGACCGCC	Design primers
4306688	CGCCGCGCTCGGAACGGTCGCCGCGCTCGGGGCGCTCACCGCGCTCGGGACGGT	Design primers
4306761	GTCGGGACGGCCACC-CTCGGGACGGCCACC-CTCGGGACGACCGCC-CTCGGAACGGCCGCC	Design primers
4315633	CCGGGGTCGCCCCGGGGCCGCCTCGGGGTCGTC	Design primers
4423923	CGGCCCGGGCCCGCCGGGGACGGGCCCGCCGGGGACGGGCCCGCC	Design primers
4425772	GCG-GCG-GCG-GGG-ACG-GCG-GAG-GCG-GAG-GCG	Design primers
4438159	CAGCAGGAGCAGCACCAGCAGCGG	Design primers
4470141	GTCGGCGTCGTCCTCGGCCTCGGC	Design primers
4494438	TCCTCGCCGTCCTCCCCGTCCTCGTCG	Design primers
4513559	CAGCAGGAGCAGCACCAGCAGCAG	Design primers
4513945	CCTGCGGGCCGCTGTGCGGCTGCTGGGGGCCCGTGTGCGGCTGCTGCGGCCCGGTGTGCGGCC	Design primers
4519670	CCGTTCCCGGGGCCGCCGTTGCCGGGTACGCCGTTCCCGGGACCG	Design primers
4531174	GGGCCCACCGAGGAGCCGACCGAGGAGCCCACCGAG	Design primers
4538869	GCGACGGTGACGGCGATGACGACG	Design primers
4544163	GCCGAGCAGGCCGAGCCGGTCGAGCAG	Design primers
4549910	GGCGACGTCGGCCGCGACCTCGGCGGCGGAGTCGGC	Design primers
4556655	CCA-CCG-CCT-CCG-CCG-CCG-CCA-CCG	Design primers
4574050	AGGTGGCGGTGGAGGCGGCGGTGG	Design primers
4574988	CCGTCCCCGGTCCGGTCCCGGTCCGGTCCCGGT	Design primers
4585855	GGCGGG-GGTGGG-GGTGGG-GGTGGG	Design primers
4603707	GGCGGGTCCCGCGCGGGCGGGCCCGGTGCGGGCGGGCCCGGTGCG	Design primers
4613554	GCGGGGGCGGCGGTGGGGGCGGGG	Design primers
4634725	TCGACGACTTCGTCGACCGCTTCGTCGACGAGTTGG	Design primers
4651206	CGCGGGCGCTGGAGCGGGCGCGCG	Design primers
4672748	CGCCGCCGACGCCGACGCCGCCGG	Design primers
4718554	GACTGTGTGTGCGGGTGAGGCTGCGTGTGTGGGTGAGGCTGTGTGTACGGGTGA	Design primers
4719900	GATGATGGGCTCCATGATGGGGTCGATGATGGGCAT	Design primers
4719973	GAGGACTTCGGAGGCGGGGACTTCGGGGGCGGCGACTTCGGGGGC	Design primers
4745842	GCGGCCGAGGGGGCCGAGGGGGCCGAG	Design primers
4745906	CCCCGGACAGCGCCCCTGACACCGCCCCGGACACGG	Design primers
4760641	GACGGGGAAGGGGACGGCGCCGGG	Design primers
4762746	GAGGGTGAGCAGGAGGATGAGCGGCAGGGTGACCAG	Design primers
4762823	CGACGGCCACGGCGGCGGCGAGGG	Design primers
4771045	CGGCCGCGGACGCGGCCCCGGCCC	Design primers
4801588	CCGAAGAGCTGGG-CCGAAGAGCTGGG-CCGAAGAGCCAGG	Design primers
4807572	CGGGCCCTCGGCCCCTCGGGCCCA	Design primers
4822910	CAGCAT-CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTA	Design primers
4824434	GCGGTCGCGGCCGCGGACGAGGTC	Design primers
4841781	CCTTC-CCCGT-CCCCT-CCCCC-TCCC	Design primers
4853495	CTGGTCTTCGGCCTGGTCGTGGGCCTGGTCAACGGC	Design primers
4861794	GTGCCTGAGGGCCTGAGAGCCTGA	Design primers
4880917	CCTCGGCCTCGCGCTCGGCCTCGC	Design primers
4907841	CGCGCCCGCCCCCGCGCCCGCGGC	Design primers
4939297	GCCTGTAGCCGCCTCTAACCGCCTCCAGCC	Design primers
4940044	TCCGACCCCGACCCCGACTCTGAC	Design primers
4940071	GGCCCCGGCACCGGTCCCGGCCCC	Design primers
4965644	GGCCCCGGCCCTGGCCGCGGCCAC	Design primers
4987457	TCTCCGCGGTCTCCTCCTCGGCGGTCGCCTCCTCGGCGGTCTCCG	Design primers
4995151	CGCCCAGGGCGGCCAGGGCGTCCAGGG	Design primers
5001522	GCGGCGGCGGCCGAGGCGGCCGCG	Design primers
5008975	GGGTCGGTGGGCTCCTCGGGGTCGGTCGGCTCGCCGGGGTCGGTGGGGTACTCG	Design primers
5043393	GTGGGTGTCGGTGTTGGTGTGGGT	Design primers
5069297	CGGACCGACCAGGCACGGGCCGGTCAGGCACGGACCAACCGGTCA	Design primers
5077315	GTGCCGCCGGGAGCCGCCTCGCCGGGAGCCGTCTCGCCGGGGGCC	Design primers
5077782	GGGGCGGACGGGACGGACGGGGCGGTC	Design primers
5083556	CGTCCTGTCCGGAACCGCCCTGTCCGGTGCCGTCCTCCCCGGAGC	Design primers
5084047	AACTCGGCCGTCGGCTGCTCGGCCGTCGACTGCTCGGCCGTCGAC	Design primers
5097897	GGCAAGGAAAGGGAAGGAGAGGGAAGGAAA	Design primers
5099738	GCGCCG-TCGGCG-TCGGCG-TCGGCG-TCGGCG-TCGGCG	Design primers
5105029	CACGAGCAGGAGCACGATCGCGAG	Design primers
5125107	CAGCCC-CGGCAC-CAGCAC-CAGCAC-CAGCAC-CAGCAC	Design primers
5132761	GGAGCCGTCCCCGGTGGCACGGTCCCCGGTTGAGCCGCCCCCGGCGGAGTCGCCCCTGGT	Design primers
5149228	ACGACCGGGACGACTGGGACGACGGGG	Design primers
5183620	TCGTCCTCGGCCGCGTCCTCCTCC	Design primers
5194447	CGCCGACGGCGCCGAAGGCGCGGACGG	Design primers
5212129	CGGCGGTTC-GGGCGGTTC-GGGCGGTTC	Design primers
5219951	GGCCGGGCTGGGCGGCGCCGGTCCG	Design primers
5246297	GGCGCGGTCGGCCCGGTCGGCGCGGTC	Design primers
5262122	GACCTC-GTCCTC-GTCCTC-GCCCTC	Design primers
5278503	CGGGTC-CGGGTC-CGCGTC-CGGGTA	Design primers
5297550	TCCTCCGCGGGTTCCTCCTCCGGTTCCTCGGAGGGT	Design primers
5362583	GGACGCGGACCCGGTCGCCGACGC	Design primers
5371862	GTCAGCAGGTCAGCGGATCAGCAG	Design primers
5442350	ACCCGTCCGGACCCATCCAGACCCATCCGA	Design primers
5480526	GGGGGTCCTGTGCCGGAAGGGCCTGTGCCGGAGGGTCCTGCGCGG	Design primers
5525506	ATCCGCGTC-CTCCGCGTC-CTCCGCGTC	Design primers
5527586	GAGCAGGTCGAGCAGGTGGCGCAGGTC	Design primers
5543517	GTGGGGTACTCGGGGTTCTCGGTGGGGTAGCCGGGGTCCTCAGAGGGGTACTCGGGAACCTCG	Design primers
5543763	ACCTCGATCGGGTAACCGGGGTCCTCGGTCGGGTACTCGGGGACCTCGGTCGGATAGTCGGGGACCTCGGTCGGGTACTCGGGGACCTCGGTCGGATAGTCGGGGACCTCGGTCGGGTACTCGGGA	Design primers
5544736	GACGACC-GGCGACC-GGCGACC-GGCGACC	Design primers
5549151	CCGGAGTGGCCGGAGGGGTCGGAGTGG	Design primers
5551510	GGTCCCCGCGGTCACCGCGGTCACCGCGTTCCCCGC	Design primers
5553010	GGGGTGCGTGGGGTGTGTGGGGTGTGT	Design primers
5553079	AGCAGGAGGT-GACAGGAGGT-GACAGGAGGT	Design primers
5556782	CCGACCGCGGCCCGACCATGGCCCGGCCGCGGC	Design primers
5569420	GCGGCCAGCGGGGCCAGCGCGGTCAGC	Design primers
5649429	GGCCCGGCGGCCCCGGCGTGCCCGGCG	Design primers
5665183	CGGCACCGACACGGGCGGCACGGGCGCGGGCAGCGCCGAAACGGG	Design primers
5678069	TCGGAGCACGCGGACCACGAGGAGCAGGCGGACCACGCGGGGCACGAGGACCAC	Design primers
5679220	CGA-CGA-CGA-CAA-CGA-CGA-CAA-CGA	Design primers
5686771	CAACCCCGACAGCCCCGACAGCCCCGA	Design primers
5709344	GG-CG-CG-GG-AG-CG-GG-AG-CG-GG-GG-CG	Design primers
5710835	GTCGCCCTCCGGAGCGGGACGTCCTCCGGAGCAGGCCGCCCCCCGGAGCAGGCCGCCCCCCGGAGCGGGCCGCCCTCCGGAGCGG	Design primers
5712871	GCAGCCGCGCCTCCCGCAGCCCGGCCTCCCGCAGCAGGGCCTTCC	Design primers
5739233	GCTCGTCGCTCGGCTCGTCGCTCTCCTCGGCGCTCG	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

2353

GCCTGTGGACACGGCCACCTGTCGACACGGCCACCTGTCGACACGTCC