Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Herbaspirillum seropedicae SmR1

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
41706	CTGGCTGGCCTGGCCGGCATGGCTGGC	Design primers
50393	TCCCCTGCCTCCCCCGCCTCCCCCGCC	Design primers
59658	AGTCCCCCTTTTTCT-ACACCCTCTTTTTCT-ACACCCTCTTTTTCT-ACACCCTCTTTTTCT	Design primers
59719	CACCCCTTTTTCTA-CACCCCTTTTTCTA-CACCCCTTTTTCTA-CACCCCTTTTTCTA-CACCCCTTTTTCTA-CACCCCTTTTTCTA-CACCCCTTTTTCTA	Design primers
85044	GCCAGC-GCCAGC-AGCAGC-GCCAGC-AGCAGC-GCCAGC	Design primers
86377	CTGCGCCAGCGCCTGCGGCAGCGC	Design primers
163286	GCCGGTATCGCTGGTATCGCCGGCATC	Design primers
168540	CGGTCACGGTGATGGTCACGGTCG	Design primers
245934	AGTTTTTTAGTTTCTTAGTTTTTG	Design primers
250165	ATGGCTCAT-GTGGCTCAT-GTGGCTCAT	Design primers
287913	ATAACTAT-CTAACTAT-CTAACTAT	Design primers
368186	GGCCGCGGCCCAGGCCGCCGCCGAAGCCGAGGCCCA	Design primers
405030	GTTCAGTTCTGTTTACTTCAGTTCT	Design primers
405691	TTGGCGGCTGCCTTGGGCGCTGCCTTAGCGGCGGCCTTGGGGGCTGCG	Design primers
417667	ACAGCAGCAAAGAAGACCGCGGCCAAGAAGCCGGCGGCAAAGAAG	Design primers
479379	AGCAAGCCAAGTAAGCCAAGTAAGCCA	Design primers
496370	TGGTGCTGTTGCTGGTGCTGGTGA	Design primers
499457	GGCATTTCTTTCTGCAGTTCTTTCTGCAGTTCTTTC	Design primers
539870	CGCAGTCCTCGTAGTCCTTGCAGTCCT	Design primers
553457	ACCTCCT-GCCCATT-GCCCATT-GCCCATT-GCCCATT-GCCCATT-GCCCATT-GCCCATT-GCCCATT-GCCCATT-GCCCATT-GCCCATT	Design primers
566884	CTTCAGCTCTTTAGCTCTTCAGCA	Design primers
595683	CATGGCGGCAAGGCGGGATGGCGG	Design primers
613484	GTTCGCGTCGATTCGCATCGATTCGCATCG	Design primers
646453	ATGACCAGTGATGACTTGTGATGAGCTGTG	Design primers
661371	TTGATCGATTGATCGATTGGTTGATTGGTTGATTGGTTGATTGGTTGATTGGTTGATTGGTTGATTGGTTGA	Design primers
662137	CAGTTGCAGTTCCGGTTGCGGTTG	Design primers
679223	GCAGCAATAC-AGAGCAATAC-AGAGCAATAC	Design primers
721240	GCATCATTGCATCACCGCTTCATTGCATCATCGTCTCACTGCATCACC	Design primers
730041	CTTCAGTGCTTCAGTACTTCGGTG	Design primers
734363	CAATAAGCGCCACATAAGCGCCGCATAAGCGCC	Design primers
787588	GATCACCA-GATCATCA-GATCATCA-GATCATCA	Design primers
804469	TGTCGTTGCCGTTGGCGTTGCCGT	Design primers
815405	CTGCCGCTGCTGCTGTCGCTGTCG	Design primers
816509	TTGGCA-TCGGCA-TCGGCA-TCGGCA	Design primers
841215	GGCCTCGGCCGCGCCCTCGGCATC	Design primers
854845	GATGAGGAAGAGGATGAAGATGAT	Design primers
857460	ATGGCAACGGGAATGGCAACGGCAACGGTAACGGGA	Design primers
857870	GGCAATGGAAATGGCAACGGCAAC	Design primers
874419	GGTGGCCGTGGCGGTGACGCTGGC	Design primers
883024	CAACCAGCACCAGCCAGTACCAATCAGCAG	Design primers
892750	ACACCCTGAATACCCTGAACATCCTGA	Design primers
898708	AAGCAGGAAAAGCAGCAAAAGCAGGCA	Design primers
910208	GCTGCTGCTACTGCTGGTGCTGGTGCTGCG	Design primers
920896	CGCCGATACG-GGCCGATACG-GGTCGATACG	Design primers
943701	CTGGCGATGGCGCTGGCGCTGGTG	Design primers
966375	GATGAAGACGACGAGGACGAAGAAGAAGAGGAAGAAGACGAAGAA	Design primers
982425	TGTCCTTGTCGTTGTACTTGTCAT	Design primers
1011523	AAGGCTGC-AAGGCTGC-AAGGATGC	Design primers
1032643	AAGCCCGCCGCAAAACCGGCCGCAAAGCCGGCCGCC	Design primers
1040381	GTGGCG-GTGGCG-GCGGCG-GTGTCG	Design primers
1046830	TTCTTCA-CTCTTCA-CTCTTCA-CTCTTCA	Design primers
1067560	ATCGTTATTGAGTGTTATTGAGTGTTATTG	Design primers
1093514	GGAAGATGAAGAGGACGAGGAAGA	Design primers
1098324	CCATGCCACCCATGCCGCCCATACCACCCATGCCGC	Design primers
1157220	TGTAGTCCGATGTAGTTCAATGTAGTCCAACGTAGTTCGA	Design primers
1232075	CCGCCGCCGCCGCCACCGCCGCCG	Design primers
1236525	CCTCGG-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC-CCCATC	Design primers
1244267	GCGCCGACGCCGACGCCGGCGCCAGCGCCA	Design primers
1253176	TTGACGGCTGCCTGACGACTGCTTAACGGTTGC	Design primers
1285999	GGCGATGAAGCCGATGAAGCCGATGAA	Design primers
1309536	GCGCCAGCGCCGGCACCAGCGCCC	Design primers
1318578	GTGGCCTGATCGTGCTCTGATCGTGGCCTGATA	Design primers
1339668	CTGGCTAACCCTGACTTACCTTGGCCAACC	Design primers
1377911	CCTTCTCAGCCTTTTCCTTCTCAGCCTTGAGCTTTTCGGCCTTTT	Design primers
1382957	TCTGG-TCAGG-TCTGA-TCTGA-TCTGA	Design primers
1416071	TGAGCTTTCCTGAGCTTTACTGACCTTTAC	Design primers
1422734	TTTCCTGAGTGTCCTGAGTGTCCTGAG	Design primers
1422797	AAATAAGAA-AAATAAGAA-AAATAAAAA	Design primers
1433294	CAACCGATCAACCGGTCAACCGAT	Design primers
1451836	TGAACCTGAATCTGAACCTGAACC	Design primers
1458891	CACAACATCAAAACATCAAAACAT	Design primers
1493314	CAG-CGT-CGG-CAG-CGG-CGG-CAG-CGG-CGG	Design primers
1498768	GCAGGCGCTGGCGCAGGCGCAGTC	Design primers
1513330	TTGGCGCGCTGGCGCGTCGGCGCG	Design primers
1523995	TCAAGCAGCCTTAAGCAGCTTTATGCAGCCTTAGGCAGCC	Design primers
1597039	CTGCCTTCT-TTGCCTTCT-TTGCCTTCT	Design primers
1625387	GGCAAGGAC-GGCAAGGAC-AGCAAGGAT-GCCAAGGAC-AGCAAGGAC-AGCAAGGAC	Design primers
1660271	AGATCAATATGATCAATACGATCAATA	Design primers
1677509	GCTCCGGCCGCCGCTCCCGCTGCCGCACCGACCGCC	Design primers
1704647	GGACTGACGGATTGACGGATTGAC	Design primers
1728749	CTGATTTC-CTGATTTC-CCGATTTC	Design primers
1739868	GGGGCTGGTGCTGGGACTGGGACT	Design primers
1741782	GTTCTCGTTGGTTCTCGTTCGTTCCCGTCG	Design primers
1742050	TGACGTGATGACTTGATGACGTGA	Design primers
1744436	GATGTGGCCGATGTGGTCGATGGGGCC	Design primers
1746387	TGGGCATCATCGGCATCATCGGCATCA	Design primers
1760048	GTTGCGGGCAGCGTTTCTGGCAGCGGGGCGGGCAGC	Design primers
1770524	TTATATCG-TTATATCG-CTATATCG	Design primers
1791782	GTTCCGGTGTTGCGGTGTTTCGGT	Design primers
1794176	GGATCAGCATGATCAGCAGGATCAGGA	Design primers
1810257	AGA-AGA-GGA-AGA-GGA-AGA-GGA-AGA-GGA-AGA-GGA-AGA	Design primers
1818076	ATCAGGTCCGTATCGGGTCCCTATCGGGTCCGT	Design primers
1824352	AGCAAGC-AGCAAGC-AGAAATC-AGCAAGC-AGAAATC-AGCAAGC	Design primers
1826504	TTAATGATGACTCAGTGATGACTCAGTGATGAC	Design primers
1854254	TTCTGACTGATTCAGATTGATTCCGAGTGA	Design primers
1857359	TCCATGAAGCAGCGATGAAGCAGCGATGAAGCA	Design primers
1915994	TGCTGCCTTGCTGCCATGGTGCCT	Design primers
1918356	TCAACATGATCAATATGATCAACATGA	Design primers
1918384	CAATGTGAT-CAATGTGAT-CAATGTGAT	Design primers
1930181	GCGGAGGCGGGGGCGGAGGCGGCG	Design primers
1931814	GGCGCGCTCA-TGCGCGCTCA-TGCGCGGTCA	Design primers
1931881	TCAGAACCAGAATCAGAATCACAA	Design primers
1950189	CGCCAT-TGCCAT-TGCCAT-TGCCAT	Design primers
1961912	GGTGCA-GGGGCA-GGGGCA-GGGGCA	Design primers
1981929	GATTTTCAGATTTCCAGGTTTTCA	Design primers
2027831	CGATCCTTGATCCTCGATCCTCGATCCC	Design primers
2030217	GCTTGCTTGCCTGCTTGCTTACTT	Design primers
2060539	CGAGATCGACATCGAGACCGAGAA	Design primers
2101436	TATTTAATAGTTCTTTAATAGTTATTTGGTAGTTATTTAATGGT	Design primers
2115134	CTTTTATTCTTTTTATTCCTTTTATTC	Design primers
2119897	CTCGGCGCGCGCCTTCTCGGCCCGGGCCTTCTCGGCGGCAGCCTT	Design primers
2119955	TTTTCGGCCGCTGCC-TTGTCGGCTGCAGCC-TTGTCGGCTGCAGCC-TTGTCGGCTGCAGCC-TTGTCGGCTGCAGCC-TTGTCGGCTGCAGCC-TTGTCGGCTGCAGCC	Design primers
2144740	TTGTCTTTGGTGGTCTTTGGTGGTCGTTGG	Design primers
2191208	GCTTCGGCTTCCGCTGCGGCTTCC	Design primers
2226693	CAGCCTGAATGCGGCCTGAATTGGGCCTGAATG	Design primers
2236781	ATCATTTAGATCATTTGGATCATTTAGATCATTTAT	Design primers
2242357	AAAATCAG-AAAATCAG-AAAATCTG	Design primers
2253506	CCTGGCCATCCTGCCCATGCTGGCCAT	Design primers
2276819	GCCTATCCGGCTTATCCGGCCTATCCC	Design primers
2281857	GGAGTGATGGGTGTGATGGGTGTGATG	Design primers
2321469	GGCCAGGTCCAGCGCCAGGTCCAG	Design primers
2323075	GCTGCGGCAGCGGCGGCGGCTTCG	Design primers
2392430	GAAAAATCGGAACAATCGGAAGAATCG	Design primers
2444092	GATGTCCTCGGCGACGATGTCCACGCCGGCGATGTCCAGGCCGAC	Design primers
2460436	GTGCCGGAGCCGGTGCCCGTGCTG	Design primers
2466284	ATTGTTGCA-ATTGTTGCA-ATTGGTGCA	Design primers
2508692	GGCAGGAAAACGCCAGGAAAGCGGCAGGAGAGC	Design primers
2515888	GCGCCAGCGCCCGGGCCAGCGCCA	Design primers
2560613	CTCAGTGGA-TTCAGTGGA-TGCAGTGGA-TGCAGTGGA-TGCAGTGGA-TGCAGTGGA	Design primers
2651254	CAGCGTAAC-CAGCATAAC-CAGCATAAC-CAGCATAAC	Design primers
2656291	GCAGCAGGTGCCGCAGGTGCAGCAGGC	Design primers
2658181	GCAGCTGGAGCAGTTGGAGCAACTGGAGCAACTGGA	Design primers
2665935	CCGAGG-CTGAGG-CTGAGG-CTGAGG	Design primers
2687399	TAGTCCTTGCTCGGTCCTTGCTCAGTCATTGCT	Design primers
2706718	GGCGCCACGCCGCCACGGCGCCGC	Design primers
2714448	TGATTTGAATTAATTTGAATTAATT	Design primers
2726839	TTGAACGATTGACCGATTGACCGA	Design primers
2728419	CTCCTCAGT-GTCCTCACT-TACCTCACT-GTCCTCACT-GTCCTCACT-GTCCTCACT-GTCCTCACT-GTCCTCACT-GTCCTCACT-GTCCTCACT	Design primers
2741427	CGC-CGC-AGC-CGC-CGC-TGC-TGC-CGC	Design primers
2757552	TTCGTGCGC-ATCGTGCGC-ATCGTGCGC	Design primers
2767620	CCTGCGCCTGGGCCAGCGCCTGCC	Design primers
2774748	CATTCACCTCCATTCGTCTCCATTCACCTC	Design primers
2883542	CCGGCACCGGAACGGGCACCGGTACCGGCA	Design primers
2895651	GTGATCTCC-GTGATCTCC-CTGATCTCC-GTGATCTGC	Design primers
2917119	CACCCA-CACCCA-CGCCCA-CGCCCA	Design primers
2919204	GAAGCGGCGGAAGCGGCAGAAGCGGAGGAAGCAGCG	Design primers
2929476	TGCGGATAGTTGCGGATAGCTGCGGGTATT	Design primers
2934688	TACAACCGAGCAGTACAACCAAGCGGTATAACCAAGCAG	Design primers
2963457	CCTGCCTCAGCCCACCTCAGCCCACCTCAG	Design primers
2989859	GCTGGCGCTGGGCCTGGCGCTGGC	Design primers
3006177	CCCCCTAGCC-ACCCCTAGCC-ATCCCTAGCC	Design primers
3019026	GCCCAGGCGCAGGTCCAGGGCCAGGCCCAG	Design primers
3035006	TCGTGAGCGTGATCATGATCGTGGTCGTGA	Design primers
3035096	TCGTGA-TCATGG-CCGTGG-TCATGG-TCATGG-TCATGG-TCATGG-TCATGG	Design primers
3048000	GAAAAGACCGAAAAGATCGAAAAGGCC	Design primers
3056514	CGTTGCGTGGCGTTAAGTTGGGTTG	Design primers
3077954	TGATCAGAATGACCAGAATGATCCGAA	Design primers
3100470	CAGCGCCGCGCCCAGCGCTGCGGCCAGCACCACGCC	Design primers
3110886	TGGGGCCGG-TGGGGCCGG-TGTGGCCGG	Design primers
3125379	AGCGCA-AGTGCA-AGTGCA-AGCGCA	Design primers
3158310	CTGATGCGGGACGATGCGGGCCGATGCGGG	Design primers
3171110	AAGGTAGAT-CAGGTAGAT-CAGGTAGAT-CAGGTAGAT-CAGGTAGAT	Design primers
3208830	ACATTTGCGGACACTTGTGCGGACACTTGTGCGGAC	Design primers
3263590	TTTCAGCTTATTTCTGCATATTTCTGCTTG	Design primers
3264164	AACAAAAGCAAATAAAAGCAAATAAAAACA	Design primers
3278583	GGCGCACTTGCTGGCGCACTTACTGGCGCACTTATT	Design primers
3278719	CGGGTGAGGGTGCGGGCGCAGGTG	Design primers
3289228	GGAGCGGGCGGTACT-GGTGCAGGCGGTGCT-GGTGCAGGCGGTGCT-GGTGCAGGCGGTGCT-GGTGCAGGCGGTGCT	Design primers
3289547	CTGCTGCCACCTGATGCCACCTGACGCCAC	Design primers
3310749	ACATTTGCTGACCTTTCCTGACCATTGCTG	Design primers
3391852	AGC-CGC-AGC-AGC-AGC-TGC-CGC-CGC	Design primers
3392304	AACAAAGAATCAAAGAATCAAAGA	Design primers
3405155	CGAGCTGAACAGAACTGAACTGAGCTGAGC	Design primers
3412049	TCTGCATCTGCTCCTGCATCTGGA	Design primers
3416140	ACTCAGTTTTTCCTCAGTTCTTCCTCAGTTCTT	Design primers
3417343	GAAGGCT-GAAGGCT-GAAGACT-GAAGGCT	Design primers
3485197	TGAGGTGGA-TGAGGTGGA-TGAGGCGGA	Design primers
3511867	TCGGAACCACAACGCGAAACCACAACGCGGAACCACAAC	Design primers
3517172	CGGTGGCGGTAGCGGTGGCGGTGT	Design primers
3520211	ATTCGGCTT-ATCCGGCTT-ATCCGGCTT-ATCCGGCTT-ATCCGGCTT	Design primers
3527165	CCGCCCGGCCCCTCCCCGCGCCGGC	Design primers
3543621	CCATCCCGCTGGCCATCGCCCTGGCCATCCTGATGG	Design primers
3565099	CACAAGCAG-CACAAGCAG-CACGAGCAG	Design primers
3567373	GCGGCATGATGCAGCATGATGCGGCACGGTGCGGCATGGT	Design primers
3598586	ATCACGAGGCTGTCACAAGGCTATCACGAGCCG	Design primers
3621504	CAATCAGGCTTGCCAATCAGGCTCGCCAATCGGGCTCGCCAATGAGGCTCGC	Design primers
3633376	CTCCCCAC-TTCCCCAC-TTCCCCAC-TTCCCCAC	Design primers
3680076	AAACAATTAATTAGAAAATTAATTAAAAAATTAATTAAAAGATTAATT	Design primers
3686738	GGTAGGCAATACCTAGGCAATACGTAAGCAATA	Design primers
3719116	TTGAATGACTGAATGATTGAATGA	Design primers
3730853	TGCTTCATTGTTTCATTGCTTCATTGCTGCAT	Design primers
3736008	CCGCCACCGCCGCCTCCACCGGCA	Design primers
3766617	CCACCGCCAGCGCCAGCGCGACCG	Design primers
3774053	GGCTCCGGCTCGGGTTCCGGCTCA	Design primers
3791570	AGCCGCGCGCAGCCTGGCGCAGCCGCCCGG	Design primers
3802036	GGCATCAGGGCGTCAGCGCATCAG	Design primers
3807713	CCGTCGCCGTCTCCGGCGTCGTCG	Design primers
3821537	GCGCAAGCCGCGCAGGCCGCGCAAGAC	Design primers
3825651	CAGGCATCACAGGCTTCACAGGCTTCA	Design primers
3859562	GATGGCGGCGGTGGCGGCGATGGCGGT	Design primers
3868291	CGGCAT-CGACAT-CGACAT-CGACAT	Design primers
3886455	ATATCGTTT-ATATCGTTT-ATATGGTTT	Design primers
3888830	AAGCTCAAAAGAACCTCAAAAGAACCTTAAAAG	Design primers
3913768	ATCGCTTTAAGCGCTTTAATCGCTTCA	Design primers
3925237	GCCTTT-GCCTTT-GCCGTT-GCCTCT-GCCCTT	Design primers
3938966	CGCACCGGC-GGCACCGGC-GGCACCGGC	Design primers
3941661	ATGGTCCA-TTGGTCCA-TTGGTCCA	Design primers
3945483	GATCAGGAACAGGATCAGGAACAG	Design primers
3954683	ACACCG-ACACCG-GCACCG-ACACCG	Design primers
4057475	GCAGCGCTTAGGCTGCGCGTAGGCAGCTCATAG	Design primers
4070063	AAAAATATAAACAATATAAAAAATATC	Design primers
4137070	CCCTGGTTGCCATAGTTGCCGCCTTGATTCCCGTAGTTGCCGCCCTGGTTGCCGTAATTGCCG	Design primers
4139316	GCTCCTGCTCTTGTCCCTGCTCTTGTCCCTGCTCTT	Design primers
4148505	GTGCTTCTT-GTGCTTCTT-CTGCTTCTT	Design primers
4148912	GGGATCAGCCTGGATCGGCCGGGATCAGAT	Design primers
4207059	CCAGGCCTATGCCCAGGGCTTTGCCCACGCCTTTGC	Design primers
4207986	GTGGACCCG-GTGGACCCG-GTGGACTCG	Design primers
4274578	CGTTGT-CGTTGT-TGTTGT-CGGTGT	Design primers
4307919	ATGACCGTGATGGCCGTGATGGCCGTG	Design primers
4320806	AGGAAGTCAGGATGTCAGGAAGTG	Design primers
4321411	TTT-TTC-TTC-CTC-TTC-CTC-TTC-CTC-TTC-CTC-TTC-CTC	Design primers
4331295	GCACCA-GCACCA-GCGCCA-ACACCA	Design primers
4332526	CGTAACGGGAAGGTAATGGGAAGGTAACGGGAAGGTAACGGGAAGGTAACGGGAC	Design primers
4339634	CGGCTCAGCCAAGCTCAGCCCGCCTCATCC	Design primers
4372703	CGCC-AGCC-AGCC-AGCC-AGCC-AGCC	Design primers
4372756	CTCATGGACTCATGCACTCATGTA	Design primers
4374591	GGACACAAGGACTCAAGGACACAC	Design primers
4388127	ATTTATTTATTTATTTTGTTTATTTAATTTATATCTTTA	Design primers
4461526	AAATATTAATATAAATATTAATAT	Design primers
4509003	ATTTATATCGTTTATATCATTTATATC	Design primers
4517431	CGAGAAACGAAGAAACGAAGAAACGAAGAAACGGAGCAACGGAGAAAC	Design primers
4551850	GTTTGCTGACATTTGCTGACCTTTCCTGAC	Design primers
4565743	TGGATCACGTTGAATTACGTTGAATCACAT	Design primers
4567961	CTGATGCTGGCGCTCTTGCTGGCGCTGCTGATGGCG	Design primers
4576612	CCCAAGCCAAAGCCGAAGCCGAAG	Design primers
4599732	GCAGCAATCAGCAACATTCAGCAGCAACCG	Design primers
4607509	GGTCCCTGCAC-TGTCCCTGCAC-TGTCCCTGCGC	Design primers
4613202	GTGCTCGACCTGCTGCTCGACCTGGCGCTCGATCTG	Design primers
4654893	AACTAGAAGA-AACTAGAAGA-AACCAGCAGA	Design primers
4729925	GACATTG-CACATTG-GACATTG-GCCATTG	Design primers
4743913	CGGGCTTGCTGGGCTTGCCGGGCTTGGCCGGCTTGC	Design primers
4745370	AGTCGCCCTTGGAGTCAGCCTTGGGGCCGCCCTTGG	Design primers
4747773	TGCTCCGGTTGCCCCGGTTGCCCCGGT	Design primers
4779015	CAGATCAAATCAGATCAGATCAAATCAGAACAGCT	Design primers
4831721	GCTGCTGCTGCGCCTGCTCCTGCT	Design primers
4841661	TAAATCTTCTAAATTTTCCAAATCTTC	Design primers
4841698	AAATCATTTATATCATTTAGATCATTT	Design primers
4863799	ACGGTAGCAATACAGTAGCAACACAGCAGCAAT	Design primers
4873207	TTTCTCTTTCGCTTTCTCTTTCGC	Design primers
4873991	GAA-GAA-GAG-GAA-GAG-GAA-GAG-GAA-GAG-GAA	Design primers
4891479	GCGGCCCTGGCCGCCCTGGCGGCGCTG	Design primers
4906579	CAAGTGCATAAGTGCACAAGTGCA	Design primers
4961697	TCGGCC-ACGGCC-TCGGCC-TGGGCC	Design primers
4968379	CGGCGGCAGCGGCGGGGGCGGCGG	Design primers
4971611	ATTCTTAATTCTTCGTTCTTAATTCTTA	Design primers
5072611	GCCCCCCTGTCA-TCCCCCCTGTCA-TCCCTCCTGTCA	Design primers
5078133	GGC-GGC-GAC-GGC-GGC-GGC-GAC-GGC	Design primers
5079505	GTTCATGCTGCTCATGCTGCTCATGCT	Design primers
5106090	CGTGGCCGTGACCGTGGGCGTTGC	Design primers
5124432	CGCAGCGCATCGCCGCCCAGGGCAG	Design primers
5150684	GCTGTGGCCGCTGTGGCTGCCGTGGCC	Design primers
5161462	GCGGCCCCGGCCTCGGCCACGGCC	Design primers
5165417	CTTTGCATCCATTGCATCCATTGCATC	Design primers
5185708	CTGGCGG-ATGGCGG-ATGGCGG-ATGGCGG	Design primers
5198959	GTGGAAGCC-GGGGAAGCC-GGGGAAGCC-GAGGAAGCC	Design primers
5225359	GCTGACAAGCATGAGGCTGAAAAGCACGAAGGTGAGAAGCGTGAG	Design primers
5242137	AAGACAAGAAGAGAAGAAGAGAAG	Design primers
5312111	CACTGACCCTGACACTGACACTGA	Design primers
5316202	CGCTGCCGCCGCCGCTGGCGCTGG	Design primers
5378161	CTCTGAATACCTCTGAACATTTCTGAACAC	Design primers
5403620	ATTCGGCCTATTCTGCCTATTCGGCGT	Design primers
5466830	GTGATCGTGACCGTGATGGTGACCGTGATG	Design primers
5489725	ATGAGTGCTCA-ATAAGTACTCA-ATAAGTACTCA-ATAAGTACTCA	Design primers
5496590	ACAGCAACACCAACAGCGGCAGCA	Design primers
5512686	CAAGAGAAGAAGAGAACAAGAGAT	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

41706

CTGGCTGGCCTGGCCGGCATGGCTGGC