Microsatellites /Tandem Repeats database

Genome: Streptomyces fulvissimus DSM 40593

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
94878CCGGACGGCC-CCGGACGGCC-CCGGACGGCC-CCGGACGGCC-CCGGACGGCCDesign primers
345684GGGCAGC-GGGCAGC-GGGCAGC-GGGCAGC-GGGCAGCDesign primers
494618AGCAGGAGA-AGCAGGAGA-AGCAGGAGADesign primers
839916ACAGACCT-ACAGACCT-ACAGACCT-ACAGACCTDesign primers
1212706GGCTCGTGGGCGGCC-GGCTCGTGGGCGGCC-GGCTCGTGGGCGGCC-GGCTCGTGGGCGGCC-GGCTCGTGGGCGGCCDesign primers
1253719CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGT-CGGGACGTDesign primers
1445991GCCGCCGGAAA-GCCGCCGGAAA-GCCGCCGGAAADesign primers
1563155CGGAGG-CGGAGG-CGGAGG-CGGAGG-CGGAGG-CGGAGG-CGGAGG-CGGAGG-CGGAGG-CGGAGGDesign primers
1651788CGGACCCCA-CGGACCCCA-CGGACCCCA-CGGACCCCADesign primers
1651825GGCTCCCAC-GGCTCCCAC-GGCTCCCACDesign primers
1712836TCCGGAACGGCTGTTCCGCGGACG-TCCGGAACGGCTGTTCCGCGGACG-TCCGGAACGGCTGTTCCGCGGACGDesign primers
1727293ACGGGTGGT-ACGGGTGGT-ACGGGTGGTDesign primers
1851339TCGTGGTGC-TCGTGGTGC-TCGTGGTGCDesign primers
1871928GG-GG-CG-GG-GG-CG-GG-GG-CG-GG-GG-CGDesign primers
2065051CGTCCGGGAGC-CGTCCGGGAGC-CGTCCGGGAGCDesign primers
2103577GCTCCGGCCCTG-GCTCCGGCCCTG-GCTCCGGCCCTGDesign primers
2305712GCTGACGGC-GCTGACGGC-GCTGACGGCDesign primers
2419990CGTCACCC-CGTCACCC-CGTCACCC-CGTCACCCDesign primers
2552619CCCCCCGG-CCCCCCGG-CCCCCCGGDesign primers
2557495TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGC-TCCGGCDesign primers
2564490CGGGGGCCGGGGCTC-CGGGGGCCGGGGCTC-CGGGGGCCGGGGCTCDesign primers
2569036GCTGCTGGGCTGTGT-GCTGCTGGGCTGTGT-GCTGCTGGGCTGTGTDesign primers
2575215AGGGGCGCCTGGG-AGGGGCGCCTGGG-AGGGGCGCCTGGGDesign primers
2589452GGACTG-GGACTG-GGACTG-GGACTG-GGACTG-GGACTGDesign primers
2660992CCGGTTGTT-CCGGTTGTT-CCGGTTGTTDesign primers
2670178CGCTGGTCT-CGCTGGTCT-CGCTGGTCTDesign primers
2745201GGGCCT-GGGCCT-GGGCCT-GGGCCTDesign primers
2789052AAGCCG-AAGCCG-AAGCCG-AAGCCGDesign primers
3193685CTCAGCAGTTCCA-CTCAGCAGTTCCA-CTCAGCAGTTCCADesign primers
3223519TCCGTCCCCTCCGCCCTC-TCCGTCCCCTCCGCCCTC-TCCGTCCCCTCCGCCCTCDesign primers
3244338TCCGTC-TCCGTC-TCCGTC-TCCGTC-TCCGTC-TCCGTC-TCCGTCDesign primers
3253669CCGAGGGAG-CCGAGGGAG-CCGAGGGAG-CCGAGGGAGDesign primers
3263374GCTGACGT-GCTGACGT-GCTGACGTDesign primers
3282784CGGCGGACTCGACGGGA-CGGCGGACTCGACGGGA-CGGCGGACTCGACGGGA-CGGCGGACTCGACGGGA-CGGCGGACTCGACGGGADesign primers
3287427GTTCCGTGACGC-GTTCCGTGACGC-GTTCCGTGACGCDesign primers
3295595CGGCTCGGGTGCTC-CGGCTCGGGTGCTC-CGGCTCGGGTGCTC-CGGCTCGGGTGCTC-CGGCTCGGGTGCTCDesign primers
3365385GAAGGCCGA-GAAGGCCGA-GAAGGCCGADesign primers
3398490CCGGTGCCGACACGGGTGCGGGTG-CCGGTGCCGACACGGGTGCGGGTG-CCGGTGCCGACACGGGTGCGGGTG-CCGGTGCCGACACGGGTGCGGGTGDesign primers
3428687TGTTCTCGC-TGTTCTCGC-TGTTCTCGCDesign primers
3521914GCTCGG-GCTCGG-GCTCGG-GCTCGGDesign primers
3528364GGGGTGTTCA-GGGGTGTTCA-GGGGTGTTCADesign primers
3652022GTGCCTG-GTGCCTG-GTGCCTG-GTGCCTGDesign primers
3670624GTGCCGAGCG-GTGCCGAGCG-GTGCCGAGCGDesign primers
3688822TCCGGTCCC-TCCGGTCCC-TCCGGTCCCDesign primers
3703104GCTGTGGT-GCTGTGGT-GCTGTGGTDesign primers
3721425GCCACC-GCCACC-GCCACC-GCCACCDesign primers
3739364TGCAGCAGG-TGCAGCAGG-TGCAGCAGGDesign primers
3856351GGACTGCG-GGACTGCG-GGACTGCGDesign primers
3859451GCCTCCCCG-GCCTCCCCG-GCCTCCCCGDesign primers
3992529GTGTTCGC-GTGTTCGC-GTGTTCGCDesign primers
4063012CGGACGGGACT-CGGACGGGACT-CGGACGGGACTDesign primers
4211454CCCGAA-CCCGAA-CCCGAA-CCCGAADesign primers
4212349CGGGGG-CGGGGG-CGGGGG-CGGGGGDesign primers
4217829GCGAAGGACCCC-GCGAAGGACCCC-GCGAAGGACCCC-GCGAAGGACCCC-GCGAAGGACCCCDesign primers
4253534GCCGTGT-GCCGTGT-GCCGTGT-GCCGTGTDesign primers
4255897GCCGTCGTG-GCCGTCGTG-GCCGTCGTGDesign primers
4372388TCGAGGAACG-TCGAGGAACG-TCGAGGAACGDesign primers
4378502AGTCGGGGG-AGTCGGGGG-AGTCGGGGGDesign primers
4543878ACCGGCACC-ACCGGCACC-ACCGGCACC-ACCGGCACCDesign primers
4544898GACGTGAAAAGC-GACGTGAAAAGC-GACGTGAAAAGCDesign primers
4651444CCCGGACCCGTGAC-CCCGGACCCGTGAC-CCCGGACCCGTGACDesign primers
4673673CCGGCGCT-CCGGCGCT-CCGGCGCTDesign primers
4725369GGCATC-GGCATC-GGCATC-GGCATCDesign primers
4725413CGGCCCGCC-CGGCCCGCC-CGGCCCGCCDesign primers
4734986CAGCTAGGG-CAGCTAGGG-CAGCTAGGG-CAGCTAGGG-CAGCTAGGG-CAGCTAGGGDesign primers
4768340CCTCTTGGG-CCTCTTGGG-CCTCTTGGG-CCTCTTGGGDesign primers
4774299CCCGGAAGC-CCCGGAAGC-CCCGGAAGC-CCCGGAAGCDesign primers
4809275CCGAGC-CCGAGC-CCGAGC-CCGAGCDesign primers
4810546CC-CC-GC-CC-CC-GC-CC-CC-GC-CC-CC-GCDesign primers
4990573CGGCTG-CGGCTG-CGGCTG-CGGCTGDesign primers
5107343CGGAAG-CGGAAG-CGGAAG-CGGAAGDesign primers
5620769CCCGGGCTGGACCCGGC-CCCGGGCTGGACCCGGC-CCCGGGCTGGACCCGGCDesign primers
5654849CCGGTG-CCGGTG-CCGGTG-CCGGTGDesign primers
5655867CGGAAG-CGGAAG-CGGAAG-CGGAAG-CGGAAG-CGGAAGDesign primers
5661767CGGTTGAC-CGGTTGAC-CGGTTGACDesign primers
5895796CCGGTCCCGGTTCGGGTT-CCGGTCCCGGTTCGGGTT-CCGGTCCCGGTTCGGGTTDesign primers
6033324GGCCCTGCT-GGCCCTGCT-GGCCCTGCTDesign primers
6113015GAGCCG-GAGCCG-GAGCCG-GAGCCGDesign primers
6225777TGCTGG-TGCTGG-TGCTGG-TGCTGGDesign primers
6290245CTCGGAGCG-CTCGGAGCG-CTCGGAGCGDesign primers
6425395GCCCCC-GCCCCC-GCCCCC-GCCCCCDesign primers
6430486ACAACGTCACAAGGC-ACAACGTCACAAGGC-ACAACGTCACAAGGCDesign primers
6463774AACGGC-AACGGC-AACGGC-AACGGCDesign primers
6477292GACTCC-GACTCC-GACTCC-GACTCC-GACTCCDesign primers
6482346CGTGGACATGGA-CGTGGACATGGA-CGTGGACATGGADesign primers
6515893GCACCC-GCACCC-GCACCC-GCACCCDesign primers
6739061GCAGGTCGA-GCAGGTCGA-GCAGGTCGADesign primers
6739128GACCTCGTGC-GACCTCGTGC-GACCTCGTGCDesign primers
6811941CCGGTCCAC-CCGGTCCAC-CCGGTCCACDesign primers
6843478CCGGTG-CCGGTG-CCGGTG-CCGGTGDesign primers
6933730CGCCGGAAA-CGCCGGAAA-CGCCGGAAADesign primers
6972419CCGGCTTCCGGCGCGAGGCCC-CCGGCTTCCGGCGCGAGGCCC-CCGGCTTCCGGCGCGAGGCCC-CCGGCTTCCGGCGCGAGGCCCDesign primers
7074335GGCCCCGTGTCG-GGCCCCGTGTCG-GGCCCCGTGTCG-GGCCCCGTGTCG-GGCCCCGTGTCG-GGCCCCGTGTCG-GGCCCCGTGTCG-GGCCCCGTGTCG-GGCCCCGTGTCGDesign primers
7254644CGGCAG-CGGCAG-CGGCAG-CGGCAGDesign primers
7256662GAAGCCGGGCAC-GAAGCCGGGCAC-GAAGCCGGGCAC-GAAGCCGGGCACDesign primers
7265839GAGCGG-GAGCGG-GAGCGG-GAGCGGDesign primers
7318705CGCCCGGTGG-CGCCCGGTGG-CGCCCGGTGGDesign primers
7371218CGGTCCTCCGGCCGTCC-CGGTCCTCCGGCCGTCC-CGGTCCTCCGGCCGTCC-CGGTCCTCCGGCCGTCC-CGGTCCTCCGGCCGTCCDesign primers
7401902CGGCCC-CGGCCC-CGGCCC-CGGCCC-CGGCCC-CGGCCCDesign primers
7503452GTCGCC-GTCGCC-GTCGCC-GTCGCC-GTCGCCDesign primers
7510839CGCATCA-CGCATCA-CGCATCA-CGCATCA-CGCATCADesign primers
7623131CCGGTGTCT-CCGGTGTCT-CCGGTGTCT-CCGGTGTCT-CCGGTGTCT-CCGGTGTCTDesign primers
7822867TGCAC-TGCAC-TGCAC-TGCAC-TGCAC-TGCACDesign primers

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