Microsatellites /Tandem Repeats database

Genome: Streptomyces fulvissimus DSM 40593

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
94876GGCCGGACGG-CCCCGGACGG-CCCCGGACGG-CCCCGGACGG-CCCCGGACGG-CCCCGGACGGDesign primers
345675GCGGGCA-GTGGGCA-GCGGGCA-GCGGGCA-GCGGGCA-GCGGGCADesign primers
494618AGCAGGAGA-AGCAGGAGA-AGCAGGAGADesign primers
494675CCCCGCCCCTGC-CCCCGCCCCTGC-CCCCGCCCCCGCDesign primers
587563GCCGGGAGCCGACCGGTGCCGGGAGCCGACCGGCACCGGGAGCCGACCGGTDesign primers
666124CCGTCTTCCCGAGTG-CCGTCTTCCCGAGTG-CCGTCTTCCCGAGCGDesign primers
826018GCACC-GCCCG-GCACC-GCACC-GCACG-GCACC-GCACC-GCACG-GCACCDesign primers
839916ACAGACCT-ACAGACCT-ACAGACCT-ACAGACCTDesign primers
943341GTCGGGTCTGGCCGTCGGGTCTGTCCGTCGGGTCTGTCCDesign primers
1058710GTGGTGCTGGGGTGTTCGGTGGTTCTGGGGTGTTCGGTGGTGCTGGGGTGTTCGGTGGTGCTGGGGTGTTCGDesign primers
1212680CGTGGGCGGCTGGCT-CGTGGGCGGCTGGCT-CGTGGGCGGCCGGCT-CGTGGGCGGCCGGCT-CGTGGGCGGCCGGCT-CGTGGGCGGCCGGCT-CGTGGGCGGCCGGCTDesign primers
1253715CCGACGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGG-ACGTCGGGDesign primers
1289142GCACCCGGAAACACCCGGAAGCACCCGGACDesign primers
1445990TGCCGCCGGAA-AGCCGCCGGAA-AGCCGCCGGAADesign primers
1563153GCCGGA-GGCGGA-GGCGGA-GGCGGA-GGCGGA-GGCGGA-GGCGGA-GGCGGA-GGCGGA-GGCGGADesign primers
1651788CGGACCCCA-CGGACCCCA-CGGACCCCA-CGGACCCCADesign primers
1651825GGCTCCCAC-GGCTCCCAC-GGCTCCCACDesign primers
1712832GGCATCCGGAACGGCTGTTCCGCGGACGTCCGGAACGGCTGTTCCGCGGACGTCCGGAACGGCTGTTCCGCGDesign primers
1727293ACGGGTGGT-ACGGGTGGT-ACGGGTGGTDesign primers
1851339TCGTGGTGC-TCGTGGTGC-TCGTGGTGCDesign primers
1871928GG-GG-CG-GG-GG-CG-GG-GG-CG-GG-GG-CGDesign primers
1978986CGGCCAGGTGTATCCGTA-CGGCCAGGTGTATCCGTA-CGGCCGGGTGTATCCGTADesign primers
2053732GTACGTGAGGCATGTACGTGAGCCATGTACGTGAGCCATDesign primers
2065050GCGTCCGGGAG-CCGTCCGGGAG-CCGTCCGGGAGDesign primers
2080567GTGGAGCCCGAGCCGCCG-GTGGAGCCCGAGCCGCCG-GTGGAGCCGGAGCCGCCGDesign primers
2103576CGCTCCGGCCCT-GGCTCCGGCCCT-GGCTCCGGCCCTDesign primers
2109286GCGCCGGCCCAGCACCGTACGGGCAGCGCGAGCCCAGCACCGTACGGGCAGCGCGGGCCCAACACCGTACGGGCADesign primers
2170278CGCGCAGGGCCGCCGCGCCGGGCCGCCGCGCCGGGCCGCDesign primers
2277245TGCCCCGGCTCTCCGTGCCCCGACTCTCCGTGCGCCGGCTCTCCGDesign primers
2305712GCTGACGGC-GCTGACGGC-GCTGACGGCDesign primers
2397598ACTGCTGGGCCTGGG-GCTGCTGGGCCTGGG-GCTGCTGGGCCTGGGDesign primers
2419990CGTCACCC-CGTCACCC-CGTCACCC-CGTCACCCDesign primers
2552619CCCCCCGG-CCCCCCGG-CCCCCCGGDesign primers
2557490GCGGTT-CCGGCT-CCGGCT-CCGGCT-CCGGCT-CCGGCT-CCGGCT-CCGGCT-CCGGCT-CCGGCT-CCGGCT-CCGGCTDesign primers
2564489GCGGGGGCCGGGGCT-CCGGGGGCCGGGGCT-CCGGGGGCCGGGGCTDesign primers
2569029GCTGTGCGCTGCTGGGCTGTGTGCTGCTGGGCTGTGTGCTGCTGGDesign primers
2575209CCTGGAAGGGGCGCCTGGGAGGGGCGCCTGGGAGGGGCGDesign primers
2589449CTCGGA-CTGGGA-CTGGGA-CTGGGA-CTGGGA-CTGGGADesign primers
2660992CCGGTTGTT-CCGGTTGTT-CCGGTTGTTDesign primers
2670178CGCTGGTCT-CGCTGGTCT-CGCTGGTCTDesign primers
2745201GGGCCT-GGGCCT-GGGCCT-GGGCCTDesign primers
2789052AAGCCG-AAGCCG-AAGCCG-AAGCCGDesign primers
2923264GGCGGGCGCCCTGGCCGGCGCCCTGGCCGGCGCCCTDesign primers
3034336TCCCTCACGCGG-TCCCTCACGCGG-TCCCTCACCCGGDesign primers
3037689GCTCCGGGCGGCT-GCTCCGGGCGGCT-GCTCCCGGCGGCTDesign primers
3193682CCGCTCAGCAGTTCCACTCAGCAGTTCCACTCAGCAGTTDesign primers
3223515CCTGTCCGTCCCCTCCGCCCTCTCCGTCCCCTCCGCCCTCTCCGTCCCCTCCGCDesign primers
3244337TTCCGT-CTCCGT-CTCCGT-CTCCGT-CTCCGT-CTCCGTDesign primers
3253669CCGAGGGAG-CCGAGGGAG-CCGAGGGAG-CCGAGGGAGDesign primers
3257897GGCTTCTTCTGCTCCGGCTTCTTCTGCTCGGGCTTCCTCTGCTCCDesign primers
3263374GCTGACGT-GCTGACGT-GCTGACGTDesign primers
3273872CCCCTGACCGGCACGGCAA-CCCCTGACCGGCACGGCAA-CCCCTGGCCGGCACGGCAADesign primers
3280686TGCCGTGCGCTGTCAGGTGTGCCGTGCGCCGTCAGGTGTGCCGTGCGCTGTCAGGTGDesign primers
3282783CCGGCGGACTCGACGGG-ACGGCGGACTCGACGGG-ACGGCGGACTCGACGGG-ACGGCGGACTCGACGGG-ACGGCGGACTCGACGGGDesign primers
3287425GTGTTCCGTGACGCGTTCCGTGACGCGTTCCGTGACDesign primers
3295592CTTCGGCTCGGGTG-CTCCGGCTCGGGTG-CTCCGGCTCGGGTG-CTCCGGCTCGGGTG-CTCCGGCTCGGGTGDesign primers
3365385GAAGGCCGA-GAAGGCCGA-GAAGGCCGADesign primers
3398488CTCCGGTGCCGACACGGGTGCGGG-TGCCGGTGCCGACACGGGTGCGGG-TGCCGGTGCCGACACGGGTGCGGG-TGCCGGTGCCGACACGGGTGCGGGDesign primers
3428687TGTTCTCGC-TGTTCTCGC-TGTTCTCGCDesign primers
3437079GAGCCCCGTAGGTCTGAGAGCCCCGCAGGTCTGAGAGCCCCGCAGGTCTGADesign primers
3495703CCGGCGGGCGGCGACGCGGACCGGTGGGCGGCGACGCGGGCCGGCGGGCAGTGACGCGGACCGGCGGGCGGCGACGCGGACCGGTGGGCGGCGACGCGGADesign primers
3521914GCTCGG-GCTCGG-GCTCGG-GCTCGGDesign primers
3528345GGGTGTTCAG-GGGTGTTCCG-GGGTGTTCAG-GGGTGTTCAG-GGGTGTTCAGDesign primers
3652022GTGCCTG-GTGCCTG-GTGCCTG-GTGCCTGDesign primers
3670623TGTGCCGAGC-GGTGCCGAGC-GGTGCCGAGCDesign primers
3688822TCCGGTCCC-TCCGGTCCC-TCCGGTCCCDesign primers
3703104GCTGTGGT-GCTGTGGT-GCTGTGGTDesign primers
3721425GCCACC-GCCACC-GCCACC-GCCACCDesign primers
3739364TGCAGCAGG-TGCAGCAGG-TGCAGCAGGDesign primers
3824748GCTCTGAGGCCCACCGGACTCCGGCCCTGAGGCCCACCGGACTCCGGCTCTGGGGCCCGCCGGACTCCGDesign primers
3856351GGACTGCG-GGACTGCG-GGACTGCGDesign primers
3859451GCCTCCCCG-GCCTCCCCG-GCCTCCCCGDesign primers
3962607GCTCGCTGCGGTTCTGGTGCTCGCTGCGGTCCTGGTGCTCGCTGCGGTTCTGGTDesign primers
3992529GTGTTCGC-GTGTTCGC-GTGTTCGCDesign primers
4063010CCCGGACGGGACTCGGACGGGACTCGGACGGGADesign primers
4151239CCGGACCGATCTGCG-CCGGACCGATCTGCG-CCGGACCGACCTGCG-CCGGACCGATCTGAGDesign primers
4211454CCCGAA-CCCGAA-CCCGAA-CCCGAADesign primers
4212349CGGGGG-CGGGGG-CGGGGG-CGGGGGDesign primers
4217824ACCCTGCGAAGG-ACCCCGCGAAGG-ACCCCGCGAAGG-ACCCCGCGAAGG-ACCCCGCGAAGGDesign primers
4253534GCCGTGT-GCCGTGT-GCCGTGT-GCCGTGTDesign primers
4255897GCCGTCGTG-GCCGTCGTG-GCCGTCGTGDesign primers
4280364CGTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCGDesign primers
4293154CCCACCCCGGTTCGCACCTCGGTC-TCCACCCCGGTTCGCACCTCGGTC-TCCATCCCGGTTCGCACCTCGGTCDesign primers
4372387ATCGAGGAAC-GTCGAGGAAC-GTCGAGGAACDesign primers
4378502AGTCGGGGG-AGTCGGGGG-AGTCGGGGGDesign primers
4378530GGGGAGCTGA-GGGGAGCTGA-GGGGGGCTGADesign primers
4543878ACCGGCACC-ACCGGCACC-ACCGGCACC-ACCGGCACCDesign primers
4544897AGACGTGAAAAG-CGACGTGAAAAG-CGACGTGAAAAGDesign primers
4609622CTCGACGGGATTCCCGACGGGATTCTCGACGGGATCDesign primers
4651439GTGAGCCCGGACCCGTGACCCCGGACCCGTGACCCCGGACCCDesign primers
4673673CCGGCGCT-CCGGCGCT-CCGGCGCTDesign primers
4717234CCGCATCCGCACCCGCGTCCGCACCCGCATCCGCATDesign primers
4725369GGCATC-GGCATC-GGCATC-GGCATCDesign primers
4725413CGGCCCGCC-CGGCCCGCC-CGGCCCGCCDesign primers
4734985TCAGCTAGG-GCAGCTAGG-GCAGCTAGG-GCAGCTAGG-GCAGCTAGG-GCAGCTAGGDesign primers
4768340CCTCTTGGG-CCTCTTGGG-CCTCTTGGG-CCTCTTGGGDesign primers
4774299CCCGGAAGC-CCCGGAAGC-CCCGGAAGC-CCCGGAAGCDesign primers
4809275CCGAGC-CCGAGC-CCGAGC-CCGAGCDesign primers
4810546CC-CC-GC-CC-CC-GC-CC-CC-GC-CC-CC-GCDesign primers
4870780GGATTCGATGTCGCGGGCTGAGGATTCAATGTCGAGGGCTGAGGATTCGACGTCGAGGGCTGAGGATTCGATGGCGCGGGCCGADesign primers
4890572CGGGTGCCGGGCAGGTGCCGGGCGGGTGCTGGGDesign primers
4918757GTCGAGGCCGACGTCGAGGCCGAGGCCGAGGCCGACDesign primers
4990573CGGCTG-CGGCTG-CGGCTG-CGGCTGDesign primers
5036056GGGACCCGGCGGAGACGTACGGGGACCCGCCGGAGGCGTACGGGGACCCGGCCGAGTCGTACGDesign primers
5069256GGCCCGTGCGGGGCCTGTGCGGGGCCCGTGCGGDesign primers
5107343CGGAAG-CGGAAG-CGGAAG-CGGAAGDesign primers
5234603ACCGGCGTTCATCGGCGTTCATCGGCGTTCDesign primers
5309201CAGGAACGGCGGACACGG-CAGGAACGGCGGACACGG-CAGGAACGGCAGACACGGDesign primers
5319184CCCAGGCCGCGACGGCACCCCAGGCCGCGAAGGCACCCCAGGCCGCGACGGCGCDesign primers
5424114GAGGCGGAGAAGAAGGACGCGGAGAAGAAGGACGCGGAGAAGAAGDesign primers
5591055GGCCTGAGCCCCGGGGCCTGGGCCCCGGGGCCTGGGCCCCGGDesign primers
5607267CGGACCCGACGCCGACGCCGACGGACCCCACGCCGACGCCTACGGATCCGACGCCGACCCCGADesign primers
5620768ACCCGGGCTGGACCCGG-CCCCGGGCTGGACCCGG-CCCCGGGCTGGACCCGG-CCCCGGGCTGGACCCGGDesign primers
5620865CCCAGCCCGCACCCAGGCCCGGACCCGGTCCGCACCCAGGCCCGGACCCGGTCCGCACCCAGGCCCGGADesign primers
5654849CCGGTG-CCGGTG-CCGGTG-CCGGTGDesign primers
5655866TCGGAA-GCGGAA-GCGGAA-GCGGAA-GCGGAA-GCGGAADesign primers
5661767CGGTTGAC-CGGTTGAC-CGGTTGACDesign primers
5699333CGTTCCCAGAGGCGTTCCCCGAGGCGTTCCCCGAGGDesign primers
5895795CCCGGTCCCGGTTCGGGT-TCCGGTCCCGGTTCGGGT-TCCGGTCCCGGTTCGGGTDesign primers
6033324GGCCCTGCT-GGCCCTGCT-GGCCCTGCTDesign primers
6113015GAGCCG-GAGCCG-GAGCCG-GAGCCGDesign primers
6225777TGCTGG-TGCTGG-TGCTGG-TGCTGGDesign primers
6290245CTCGGAGCG-CTCGGAGCG-CTCGGAGCGDesign primers
6425395GCCCCC-GCCCCC-GCCCCC-GCCCCCDesign primers
6428659GTCCGCCGCGAAGTCCGCCGCGAGGACCGCCGCGAADesign primers
6430485GACAACGTCACAAGG-CACAACGTCACAAGG-CACAACGTCACAAGGDesign primers
6463774AACGGC-AACGGC-AACGGC-AACGGCDesign primers
6477292GACTCC-GACTCC-GACTCC-GACTCC-GACTCCDesign primers
6482337GGACATGGGCGTGGACATGGACGTGGACATGGACGTDesign primers
6515866CCAGCA-CCCGCA-CCAACA-CCCGCA-CCGGCA-CCCGCA-CCCGCA-CCCGCADesign primers
6519193GCACCCGGGGCACCAGCAGCCGGGGCACCAGCACCCGGGGCACCGDesign primers
6555405ATCGACAAGAAGACCGACAAGAAGACCGACAAGAAGDesign primers
6709311CTCGGTCCAG-CTCGGTCCAG-CTCAGTCCAGDesign primers
6718667CGGGTGTGGGGG-CGGGTGTGGGGG-CGGCTGTGGGGGDesign primers
6739061GCAGGTCGA-GCAGGTCGA-GCAGGTCGADesign primers
6739127GGACCTCGTG-CGACCTCGTG-CGACCTCGTGDesign primers
6811941CCGGTCCAC-CCGGTCCAC-CCGGTCCACDesign primers
6843478CCGGTG-CCGGTG-CCGGTG-CCGGTGDesign primers
6933730CGCCGGAAA-CGCCGGAAA-CGCCGGAAADesign primers
6972416TCACCGGCTTCCGGCGCGAGG-CCCCCGGCTTCCGGCGCGAGG-CCCCCGGCTTCCGGCGCGAGG-CCCCCGGCTTCCGGCGCGAGGDesign primers
7074331GACCGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGT-GTCGGGCCCCGTDesign primers
7254644CGGCAG-CGGCAG-CGGCAG-CGGCAGDesign primers
7256661GGAAGCCGGGCA-CGAAGCCGGGCA-CGAAGCCGGGCA-CGAAGCCGGGCADesign primers
7265839GAGCGG-GAGCGG-GAGCGG-GAGCGGDesign primers
7318704CCGCCCGGTG-GCGCCCGGTG-GCGCCCGGTGDesign primers
7371217TCGGTCCTCCGGCCGTC-CCGGTCCTCCGGCCGTC-CCGGTCCTCCGGCCGTC-CCGGTCCTCCGGCCGTC-CCGGTCCTCCGGCCGTCDesign primers
7394764GGGTCGGGGCGGATCGGGGCGGATCGGGGCGGGGCGGGGCDesign primers
7401901TCGGCC-CCGGCC-CCGGCC-CCGGCC-CCGGCC-CCGGCCDesign primers
7502654CCGGGGCCGCC-CCGGGGCCGCC-CCGGGGCCGACDesign primers
7503452GTCGCC-GTCGCC-GTCGCC-GTCGCC-GTCGCCDesign primers
7510839CGCATCA-CGCATCA-CGCATCA-CGCATCA-CGCATCADesign primers
7623130CCCGGTGTC-TCCGGTGTC-TCCGGTGTC-TCCGGTGTC-TCCGGTGTC-TCCGGTGTCDesign primers
7822866TTGCA-CTGCA-CTGCA-CTGCA-CTGCA-CTGCADesign primers

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