This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 98757 | CTCCGTTGCCGTCTTCTTTACCAGGTTTGTTGCCGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTACCAG | Design primers |
| 98830 | CTTGTTGTTGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGTTTGTTGTTGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTACCAGGTTTTTTGTTGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGTTTGTTGTTGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTACCAGG | Design primers |
| 212365 | TAATCATTTTAACCATCATTTTAATTATCATTTTAA | Design primers |
| 283006 | TTAGTATTATTATTTGTATTATTA | Design primers |
| 314965 | AAAGAAATGAAAAAAGAAGATAAGA | Design primers |
| 424471 | GA-TA-AA-AA-TA-AA-TA-TA-AA-GA-AA-AA | Design primers |
| 428450 | GG-AA-AA-TA-GC-AA-AA-TA-GA-AA-AA-TA | Design primers |
| 432180 | AATAATAAAAAATAATGCAACATAATAATA | Design primers |
| 443285 | AA-CA-TA-AG-CA-TA-AA-TA-TA-AA-GA-TA | Design primers |
| 583407 | GACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGTGACTCAGACTCAGATAGCGACTCAGACTCA | Design primers |
| 583485 | GACTCAGACAGCGACTCAGACTCAGATAGTGATTCAGATTCGGACAGCGACTCAGATTCAGACAGCGAATCAGATTCGGATAGCGACTCAGACTCAGATAGCGACTCA | Design primers |
| 583594 | ACAGCGACTCAGATTCAGACAGTGACTCAGACTCAGACAGCGACTCAGATTCAGACAGCGATTCAGATTCGGATAGCGACTCAGATTCAG | Design primers |
| 583719 | GACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGACTCAGACAGCGATTCAGACTCA | Design primers |
| 587853 | GACAGCGATTCAGACTCA-GACAGCGATTCAGACTCA-GATAGTGATTCAGATTCA-GATAGTGATTCAGATTCA-GATAGTGATTCAGATTCA-GACAGCGACTCAGACTCA-GATAGTGACTCAGACTCA-GATAGCGATTCAGATTCA-GATAGCGATTCAGACTCA-GACAGCGATTCAGATTCA-GACAGCGACTCAGACTCA | Design primers |
| 588066 | TCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGACAGTGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGATTCAGAC | Design primers |
| 588237 | GATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGACTCAGACTCAGACAGTGATTCAGATTCAGATAGCGACTCAGACGCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGTGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGTGATTCAGACTCA | Design primers |
| 591818 | ATCAGACAGTGATTCAGA-CTCAGACAGTGATTCAGA-CTCAGACAGCGACTCAGA-TTCAGACAGTGATTCAGA | Design primers |
| 591906 | GATTCAGACAGCGACTCAGACGCAGACAGCGATTCAGACGCAGACAGCGACTCA | Design primers |
| 592036 | CAGATAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGCGACTCAGACTCAGACAGTGACTCAGACTCAGACAGCGATTCAGATTCAGATAGCGACTCAGATT | Design primers |
| 592152 | GATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGACAGTGATTCAGACTCAGATAGC | Design primers |
| 639617 | AA-TA-AA-AA-TA-AC-TA-TA-AA-CA-TA-AA | Design primers |
| 682343 | AAAATTAATATTAAAAATAAAAAT | Design primers |
| 705258 | ATAAAGACAAAGATAAAGATAAAG | Design primers |
| 760068 | AAATTTTTTTAAATTTGTTCAAGTTTTTCT | Design primers |
| 828995 | TAGTGGTTCAGATTCAGC-GAGTGATTCAGATTCAGC-AAGTGATTCAGACTCAGC-GAGTGATTCAGATTCAGC-AAGTGATTCAGATTCAGC-AAGTGATTCAGATTCAGC-AAGTGATTCAGACTCAGC-AAGTGATTCAGATTCAGC-AAGTGATTCAGATTCAGC-AAGCGATTCAGATTCAGC-GAGCGATTCAGATTCAGC-GAGCGATTCAGATTCAGC | Design primers |
| 829263 | GATAGCGATTCCGACTCAGATAGCGACTCAGATTCAGACAGCGATTCTGACTCAGACAGCGATTCTGACTCA | Design primers |
| 829416 | TCAGATTCCGATAGCGATTCAGATTCCGACAGTGATTCCGACTCAGATAGCGAT | Design primers |
| 829473 | GACTCAGATAGCGACTCA-GATTCAGACAGCGATTCA-GATTCAGACAGCGATTCA-GACTCAGACAGTGACTCA-GATTCAGATAGCGATTCA | Design primers |
| 829564 | ATTCAGACAGTGATTCAGACTCAGATAGCGATTCAGATTCCGACAGTGACTCAGACTCAGACAGCGATTCAGATTCCGATAGCGATTCAGATTCCGACAGTGACTCAG | Design primers |
| 829697 | GAGTGATTCAGATTCAGATAGCGATTCAGAATCAGATAGTGACTCAGACTCAGACAGTGATTCAGATTCAGATAGTGACTCAGACTCAGACAGCGATTCAGAATCAGATAGTGACTCCGATTCAGACAGCGATTCAGAATCAGATAGTGACTCCGATTCAGA | Design primers |
| 856271 | AAAAGTATAAAAGTTTAAAAGAAT | Design primers |
| 1000264 | TCAGGGTTGTTAGGGTTGTCAGGGTTA | Design primers |
| 1000297 | TCATCTGGGTTGTTAGGGTTATCAGGATTGTTAGGGTTATCAGGATTGTTAGGG | Design primers |
| 1084840 | CTTTAACTT-CTTTAACTT-CTTTAGCTT | Design primers |
| 1213292 | TATAGAATTATATAATTATAGAAA | Design primers |
| 1322296 | TATTAAAGAATATGAAATAATAGAAAAGAA | Design primers |
| 1324682 | CTGCTTCTTCTTCGGCTTCTTCTT | Design primers |
| 1372484 | ATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTG | Design primers |
| 1695554 | TTCTTTTTTTATCTTTTCTATTCTT | Design primers |
| 1852711 | AATAATAATAGTAATCATAACAAT | Design primers |
| 1922621 | ACAATTTAATAAACTTTAATAGAATTTTAT | Design primers |
| 1978848 | ATATATACAATATACACAATATACACA | Design primers |
| 2026045 | TTTGGATTCGGATTTGGCTTTGGT | Design primers |
| 2307380 | AACTACAACGACTACAACAACTACGACAACTACATC | Design primers |
| 2320200 | TAATATATCAATATATTGATATAT | Design primers |
| 2390001 | TTTAAATTAATTTTATGTAATATAA | Design primers |
| 2498770 | ATCTTTATAATCTTTAAAATCTTTAAA | Design primers |
| 2589539 | TATTTTAAATTTTATATTTTTTATTTTT | Design primers |
| 2615507 | ACTTACTTTTAATTACTTTCACTTTCTTAT | Design primers |
| 2663179 | CTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCG-CTGTCTGAATCTGAATCGCTATCCGAGTCTGAGTCG-CTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCG-CTATCTGAATCTGAGTCG | Design primers |
| 2663306 | TGTCTGAGTCTGAATCGC-TATCTGAGTCTGAGTCGC-TGTCTGAGTCTGAGTCGC-TGTCTGAGTCTGAATCGC-TATCTGAATCTGAGTCGC-TGTCTGAGTCTGAGTCGC-TATCTGAGTCTGAGTCGC-TGTCTGAGTCTGAGTCGC-TGTCTGAATCTGAATCGC-TGTCTGAGTCTGAATCGC-TATCTGAGTCTGAATCGC-TATCTGAGTCTGAATCAC-TGTCTGAGTCCGAGTCAC-TGTCTGAATCTGACTCAC-TATCTGATTCTGAGTCGC-TATCTGATTCTGAGTCGC-TGTCTGAATCTGAATCAC-TGTCTGAATCCGAATCGC-TATCTGATTCTGAATCGC-TATCTGAATCTGAATCGC-TATCTGAATCTGAGTCGC-TATCTGATTCTGAATCGC-TATCTGATTCTGAGTCGC-TGTCTGAATCTGAATCAC-TGTCTGAATCCGAATCGC-TATCTGATTCTGAGTCGC | Design primers |
| 2688391 | GGATCTTTCGATGCATCTTTCAATGCATCTTTCGAT | Design primers |
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