Microsatellites /Tandem Repeats database

Genome: Corynebacterium glutamicum ATCC 13032 Kitasato

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
26626CTTCACTGAGACCCTCAGTTTCTACACTGAGAGCGTCACTTTATACACTGAGACCCTCAGTTTCTDesign primers
28132GGGACTGTTTAAGACTGTTTAGGACTGTTTDesign primers
33712CAGCCTCAGCCACAACCTCAGGCTCATCCTDesign primers
85794AGCTGCTGG-TGCTGCTGG-TGCTGCTGGDesign primers
297449CAGGGCGCACC-CCAGGCGCACC-CCAGGCGCACC-CDesign primers
359911AGGCGCGACAACCTGGGGAGCGACAACCTGGGGCGCGACTGCCTGAGGDesign primers
411699GCTTCCGGA-ACTTCCGGA-ACTTCCGGADesign primers
417434CCCCATAA-ACCCATAA-ACCCATAADesign primers
497466GCAGAAGCAGACGTAGAAGCAGATGCDesign primers
728619CCCTTATTGAA-CCCTTATTGAA-TTCTTATTGAA-TTCTTATTGAADesign primers
775063TTTCTG-TTTCTG-CTTCTG-CTTCTG-TTTCTGDesign primers
924046ATAGAATCAGACATAGAATTAGGCATAGAATTAGGCATAGAADesign primers
957567GTGTGC-GTGTGC-GTATGC-ATGTGCDesign primers
957627TAGTTTCGGACCGCGGTACTTTCGGACTCCGGTAGGTTCGGACCGCGGTACTTTCGGACTCCGGTAGGTTCGGACCGCGGTACTTTCGGACTCCGGTAGGTTCGGACCGCGATAGTTDesign primers
962594GAAATGCAGTTATGTCACAAAGCAGTTATGTCACAAAGCAGTTATGTCDesign primers
1185122GATGACGAGGACGATGAGGATGATGADesign primers
1232562CACCGTAAGGCACCGAAAGTTACCGAAAGGDesign primers
1265616ACACTCAGGGCC-AAGCTCAGGGCC-AAGCTCAGGGCC-ADesign primers
1452651GCTAAAAACTTCTC-GCTAAAAACTTCTC-GCTAAAGGCTTCTCDesign primers
1606377GTGTCGGTGACGGTGGCGGTGTTGDesign primers
1671110AGCTCTAACAAGAAGCTTTAACAAGAAGCTCTAACGAAAAGCDesign primers
1680278GCTTGTGCTTTAAGGCTGTGCTTTAAGGCTGTGCTTTAADesign primers
1774628GTTGTCGTCTCTGCTGTTGTCTCTGTTGTCGTTTCAGDesign primers
1784420GTCACCCTTGTCGCCCTTCTCACCCTTGTDesign primers
1784666GTCCTTACCGTCTTCGCCGTCCTTGCCGTCTTCTCCATCTTTACCGTCTTCACCDesign primers
1800426TCTACTGCACCTGTTGCA-CCTACTGCACCTGTTGCA-CCTGTTGCACCTGTTGCA-CCTGTTGCACCTGTTGCA-CCTGTTGCACCTGTTGCADesign primers
1836025GTAACGGAACGTAACGATACGTAACGTTACGDesign primers
1887615ACACAACACCACACAACAAAAAACAACDesign primers
1937490TTGCATCGT-CTGCATCGT-CTGCATCGTDesign primers
1953486CAGCATCATCATCAGCCTCAGCGTCDesign primers
2031150CCAAAGCCCTGACCATTGCCCTGACCATTGCCCTGADesign primers
2046041GCTTGTTAAAAGCTCGTTAGAAGCTTGTTAAAAGCDesign primers
2071660GCTTGCCTAAACCAGCGT-TGCTGCCTAAACCAGCGT-TGCTGCCTAAACCAGCGT-TGCTGCCTAAACCAGCGTDesign primers
2082893TTTAGCCCGATCTAGCCCGATCTAGCCAGADesign primers
2095845GA-GC-CA-CC-CT-GT-GG-GC-GT-GA-AC-CG-CC-CT-GA-GG-GC-GT-GG-TC-CA-CC-CT-GT-GG-GC-GT-GDesign primers
2149481TGCGGGATGAACGCGGGATAAATGCGGGATAAADesign primers
2163284CTTCAGATGCTGTGCCTTCAGAAGTTGTGCCTTCAGAAGGCGTGCCDesign primers
2174848TCCGCTACTGCAGGTTCCTCAACAACTGCAGGTTCCTCTGCTACTGCAGGTTCCTCDesign primers
2174906CAATTGCTGGTTCCTCTGCTACTGCAGGTTCCTCTGCTACTGCAGGTTCCTCTGCDesign primers
2275622AGCTGCAGCTGTGGCTGCACCTGCAGDesign primers
2340269TTAAGGAAGAGCCAAAGAAGGAAGAGCCCAAGAAGGAAGAGCCCADesign primers
2378451ACAATGCAACGATGCAACGATGCADesign primers
2430071GTCACGTCTTTAGTCACGTTTTTGGTCAGATCTTTAGDesign primers
2441743CATGGGCAT-CATGGGCAT-CATCGGCAT-CATGDesign primers
2598662TTCTTT-GTCTTT-GTCTTT-GTCTTTDesign primers
2642537GGCTGGGGT-TGCTGGGGT-TGCTGGGGTDesign primers
2649651CGCCACCGCAACCGCTACCGCCACCDesign primers
2721425GCCACCCCCGCCACCCCAACCACCCCCGDesign primers
2762722TTCACCGCTGGTTTCACTGCCGGTTTCACCGCTGGCTTCDesign primers
2792798AAGAAGACCACTAAGAAAACTACTAAAAAGACCACCDesign primers
2799461TTGTGCACACTCAGTGTCATGACCTTATGCACACTTAATGCCATGACCTTGTGCATGCATAGTGTCATGACCTTGTGCACACDesign primers
2827837GCCAGCCCCCTCCAGTCCCCGCCAGCTCCADesign primers
2918777TCCGACTAATTACGACTAGTTCCAACAAATDesign primers
2995583CAATGATGA-GAATGATGA-GAATGATGADesign primers
3075498GATTTTGGTGTG-GCCTTTGGTGTG-GCCTTTGGTGTG-GDesign primers
3105658GTGGCGAGATGCCTAGCGGTGACATGCCTACTGGTGAGATGCCTTDesign primers
3128536ACACGAAGG-CCACGAAGG-CCACGAAGGDesign primers

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