Microsatellites /Tandem Repeats database

Genome: Leadbetterella byssophila DSM 17132

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
144594CATTTGAATTGCCTCCAG-ATTTTGCATTGCCTCCAG-ATTTTGCATTGCCTCCAG-ATTTTGCATTGCCTCCAG-ATTTTGCATTGCCTCCAG-ATTTTGCATTGCCTCCAGDesign primers
572354GGGGTCAATGACCTCCGGAATAGGGGGTCAGTATCTTCCGGAATAGGGGGTCAATGACGTCCGGAATATDesign primers
1017540AGTTGACAGTTGAGAATTGACAGTTGACDesign primers
1017606TGTCCAC-TCTCCAC-TCTCCAC-TCTCCACDesign primers
1018248ATTTTCCATTTTCAACTTTCCATTTTCADesign primers
1019381TAGTTGAAAGTTGATAATTGAGAGTTGADesign primers
1021828AATTGACAGTTGACAGTTGACAGTTGACAATGGACDesign primers
1229428CACAAGAAGAGATCAATA-ATCAAGAAGAGATCAATA-ATCAAGAAGAGAACAATA-ATCAAGAAGAGACCAATADesign primers
1354697CGGAAGCAACTGGGGCGGAAGCAGCTGGGGCGGAGGAAGCTGGGGDesign primers
1403289AATGATT-AATGGTT-AATGGTT-AATGATTDesign primers
1403686CTCATTA-ACCATTA-ACCATTA-TCCATTA-ACAATTA-ACCATTA-ACAATTA-ACCATTA-ACAATTA-ACCATTA-TCCATTA-ACCATTADesign primers
1425216TTGTTAATTTTATTAATTTTCTTAATTDesign primers
1581864TA-TT-TT-TT-TA-AT-TT-TT-TA-TT-TT-TTDesign primers
1940904TAAAATCCTGAAATCCCAAAATCCDesign primers
1961874GGTATTGATATTGGTCTTGATATTDesign primers
2123595GGAGCTCAAGGACCTGCCGGGCCACAAGGACCTGCCGGAGCCCAAGGACCCGCTDesign primers
2188133AAAAATATACAAATAATATATAAAATATGTACADesign primers
2374640ATTAATAATTAACAATTAATCATTAACAATTAGTADesign primers
2420197TTGATCTGGATCTTGATCTTGATTDesign primers
2620247GGACTAAAAACTAA-TCACTAAAAACTAA-TCACTAAAAACTAA-TCACTAAAAACTAA-TCACTAAAAACTAADesign primers
2630320CCAGAAAACCCAAGATAACCCCATAAAACADesign primers
2755221ATTAATAATTAACAATTAATCATTAACAATTAGTADesign primers
3122933GCAGCAGCAGCTGAATCTAAAACAGCAGCAGCTGAATCAACAGCAGCAGCAGCTTCTTCTACADesign primers
3171027GAGGGCCTTGAGGGCCTACAGGGCCTTDesign primers
3209247AGGACCTTGTGGACCTTGAGGACCTTGDesign primers
3551093TAAACGTTTATATTCGTTTATAAATGTTTGDesign primers
3770203TTCTTCTTGTTCTTCTTATACTTCDesign primers

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