Microsatellites /Tandem Repeats database

Genome: Escherichia coli LF82

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
76043GCAGCAACAGCAGCAGCGCCAGCADesign primers
542826ATATCAATACCAATATCCATTTCADesign primers
730089CGGCAGCAGAGAAAGCGGCAGCCGACAAAAAAGCAGCAGAAAAAGDesign primers
730161AGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGDesign primers
825991TCTGGAAGCTGTGGAAGCTGTGGAAGCDesign primers
962637GCGTCGCGAGCGTGGCGAACGTCGCGADesign primers
1608782CCCGACAGCCTGACAGCCTGACAGDesign primers
1622541TTCTTGATCTGTATCTTTATCTGTATCTTTATCTGTDesign primers
1864720CGGGATCGGCATCGGCATCGGGTTDesign primers
1966033ACC-AGC-ACC-ACC-AGC-AGC-ACC-ACCDesign primers
2075932TTATTTTTTATTTGTTTTTATTGGTTTTTADesign primers
2125284TAATCTTAGTAATCTTACTAATCTTTGDesign primers
2327126TTATATGCCTTTATTTGCTTTTTTATGCCADesign primers
2921013GTTGTGATGTTGTGTTGTTGTGTTDesign primers
3185634CCTTTGCTTTCTTTTCCTTGCGTTTDesign primers
3350645CGCACGGCCAGCACGGCCCGCACGACCDesign primers
3521120GTCGTG-GTCGTG-ATCGTG-GTGGTG-ATCGTGDesign primers
3540088TT-TT-TG-TT-TT-AT-TT-TT-TG-TT-TT-TA-TT-TT-TTDesign primers
3774990AGCGCCATAAGCACCATAAGCGCCATTDesign primers
3819426AACACTGCTGATATCGCCACTAACACTACGGATATTGCCACCAACACTGCCAATATCGCCGATAACACTGCTGATATCGCCACTAACACTACGGATATTGCCACCAACACTGCCAATATCGCCGATAACACTGCTGATATCGCCACTAACACTACGGATATTGCCACCAACACTGCCAATATCGCCGATAACACTGCGGATATCGCCACTAACACTACGGATATTGCGACTDesign primers
4164762AATGCCAATGGCGATGCCAATTCCDesign primers
4513010ATGGGCGGCATGGGTGGCATGGGCGGCDesign primers
4720526TCAGCAACA-GCAGCAACA-GCAGCAACADesign primers
4750183AAGCGGCGAAAGCGGTGAAAGCGGCAADesign primers
4752452AATCTATTCAAGTATCTATTCACGAATCTATTCATTDesign primers
4772968AGCACCACCATTACCACCACCATCACCATCACCATTDesign primers

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