Microsatellites /Tandem Repeats database

Genome: Mycobacterium bovis BCG str. Pasteur 1173P2

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
109200CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACCDesign primers
271368CCGTCGCAAAC-CCGTCGCAAAC-CCGTCGCAAACDesign primers
363018GCGCCGCCG-GCGCCGCCG-GCGCCGCCGDesign primers
363336CCGCCGGCC-CCGCCGGCC-CCGCCGGCCDesign primers
364625CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
366639CGCCGCCGG-CGCCGCCGG-CGCCGCCGGDesign primers
367571CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
367614TGCCGCCGG-TGCCGCCGG-TGCCGCCGGDesign primers
458138TGCCGAGGTTTGCAC-TGCCGAGGTTTGCAC-TGCCGAGGTTTGCACDesign primers
503526TTGTGGGCC-TTGTGGGCC-TTGTGGGCC-TTGTGGGCCDesign primers
703403CCGGTGCCG-CCGGTGCCG-CCGGTGCCGDesign primers
704032GCCGTTGCC-GCCGTTGCC-GCCGTTGCCDesign primers
704091CGCCGTTGC-CGCCGTTGC-CGCCGTTGCDesign primers
704205CGTTGCCGC-CGTTGCCGC-CGTTGCCGCDesign primers
871225CGGCAACGG-CGGCAACGG-CGGCAACGGDesign primers
871612CGGCGGGGC-CGGCGGGGC-CGGCGGGGCDesign primers
872503CGGCAACGG-CGGCAACGG-CGGCAACGGDesign primers
957929CGGCGGGGC-CGGCGGGGC-CGGCGGGGCDesign primers
1143411CGAATA-CGAATA-CGAATA-CGAATADesign primers
1152152GGGATGCCGATGCCC-GGGATGCCGATGCCC-GGGATGCCGATGCCCDesign primers
1219003TTGCCGCCG-TTGCCGCCG-TTGCCGCCGDesign primers
1219057TTGCCGCCG-TTGCCGCCG-TTGCCGCCGDesign primers
1219859CGGTGCCGC-CGGTGCCGC-CGGTGCCGCDesign primers
1243941GCCGGTGGC-GCCGGTGGC-GCCGGTGGCDesign primers
1369539CGGCGA-CGGCGA-CGGCGA-CGGCGADesign primers
1643213CGCCGTTGC-CGCCGTTGC-CGCCGTTGCDesign primers
1655851GCCGCCGGT-GCCGCCGGT-GCCGCCGGT-GCCGCCGGTDesign primers
1658941CCCGCCGGG-CCCGCCGGG-CCCGCCGGGDesign primers
1662540CCCGCCGGG-CCCGCCGGG-CCCGCCGGGDesign primers
2000547CCG-CCG-GCG-CCG-CCG-GCG-CCG-CCG-GCGDesign primers
2000963CCCGCCGGC-CCCGCCGGC-CCCGCCGGCDesign primers
2001701GCCGCCGTT-GCCGCCGTT-GCCGCCGTTDesign primers
2001743CGCCCCACC-CGCCCCACC-CGCCCCACCDesign primers
2089574CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
2090044CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
2581251CAGTGCCAA-CAGTGCCAA-CAGTGCCAADesign primers
2908157CCGCCGTTT-CCGCCGTTT-CCGCCGTTTDesign primers
3724842CCGCCGTCA-CCGCCGTCA-CCGCCGTCADesign primers
3726368GTTGCCGCC-GTTGCCGCC-GTTGCCGCCDesign primers
3727387CGTTGCCGC-CGTTGCCGC-CGTTGCCGCDesign primers
3767231CGGTGGCAA-CGGTGGCAA-CGGTGGCAADesign primers
3767463GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3907614CCGGCGGGG-CCGGCGGGG-CCGGCGGGG-CCGGCGGGGDesign primers
3907688AACGGCGGC-AACGGCGGC-AACGGCGGC-AACGGCGGCDesign primers
3916266CGGCGGGAC-CGGCGGGAC-CGGCGGGACDesign primers
3921276GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3921621GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3921966GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3922311GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3924272CGGCAACGG-CGGCAACGG-CGGCAACGGDesign primers
3928070GCCGGCGGG-GCCGGCGGG-GCCGGCGGGDesign primers
3928705CGGCGGCAC-CGGCGGCAC-CGGCGGCAC-CGGCGGCACDesign primers
3928992ACGGTGGTA-ACGGTGGTA-ACGGTGGTADesign primers
4015813GCCGCCCGC-GCCGCCCGC-GCCGCCCGCDesign primers
4067280CGCCGGCGG-CGCCGGCGG-CGCCGGCGGDesign primers
4067367CGGCGCCGG-CGGCGCCGG-CGGCGCCGGDesign primers
4134112ACCCGGCAT-ACCCGGCAT-ACCCGGCATDesign primers
4142013CGCGGACGGGAA-CGCGGACGGGAA-CGCGGACGGGAADesign primers

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