This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 317308 | CAAAAGAT-CAAAAGAT-CAAAAGAT | Design primers |
| 340169 | CTTTTGAT-CTTTTGAT-CTTTTGAT-CTTTTGAT-CTTTTGAT | Design primers |
| 501124 | GGTGGTGCG-GGTGGTGCG-GGTGGTGCG | Design primers |
| 555200 | TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA | Design primers |
| 555396 | GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG-GATAGCGGAAGAGGCTCG | Design primers |
| 556492 | ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG-ATAGCGGAAGAGGCTCGG | Design primers |
| 556578 | TCGGATAGCGGAAGAGGC-TCGGATAGCGGAAGAGGC-TCGGATAGCGGAAGAGGC-TCGGATAGCGGAAGAGGC | Design primers |
| 556651 | CGTGTAGCGGAAGAGGCT-CGTGTAGCGGAAGAGGCT-CGTGTAGCGGAAGAGGCT | Design primers |
| 556727 | TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA | Design primers |
| 557776 | GAGGCTCGTGTAGCGGAA-GAGGCTCGTGTAGCGGAA-GAGGCTCGTGTAGCGGAA | Design primers |
| 557831 | AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG-AGGCTCGGATAGCGGAAG | Design primers |
| 558002 | TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA-TAGCGGAAGAGGCTCGGA | Design primers |
| 710168 | TACGGTGGCTATGGCGGT-TACGGTGGCTATGGCGGT-TACGGTGGCTATGGCGGT-TACGGTGGCTATGGCGGT | Design primers |
| 810322 | GGCACA-GGCACA-GGCACA-GGCACA-GGCACA | Design primers |
| 810538 | GGATCGGGCTCT-GGATCGGGCTCT-GGATCGGGCTCT | Design primers |
| 820477 | TTTTGATT-TTTTGATT-TTTTGATT | Design primers |
| 879503 | GTTACCGGAACCGTG-GTTACCGGAACCGTG-GTTACCGGAACCGTG | Design primers |
| 902697 | AGGGGCACCAGCAGC-AGGGGCACCAGCAGC-AGGGGCACCAGCAGC | Design primers |
| 902752 | GCACCAGCAGGAGGG-GCACCAGCAGGAGGG-GCACCAGCAGGAGGG-GCACCAGCAGGAGGG | Design primers |
| 1153165 | GGGTGCGGCCTGTTGCAC-GGGTGCGGCCTGTTGCAC-GGGTGCGGCCTGTTGCAC-GGGTGCGGCCTGTTGCAC-GGGTGCGGCCTGTTGCAC | Design primers |
| 1281035 | TCTTGACGTCCC-TCTTGACGTCCC-TCTTGACGTCCC-TCTTGACGTCCC | Design primers |
| 1389116 | CAGAAAGGGCTT-CAGAAAGGGCTT-CAGAAAGGGCTT-CAGAAAGGGCTT-CAGAAAGGGCTT-CAGAAAGGGCTT | Design primers |
| 1398571 | GGTGGC-GGTGGC-GGTGGC-GGTGGC | Design primers |
| 1679268 | CCTAGGTAATTC-CCTAGGTAATTC-CCTAGGTAATTC | Design primers |
| 1797070 | GAAGTCGCCGAAGAAGAGGCCGAG-GAAGTCGCCGAAGAAGAGGCCGAG-GAAGTCGCCGAAGAAGAGGCCGAG | Design primers |
| 1797275 | AAGAGGCCGAGGAAGTCGCCGAAG-AAGAGGCCGAGGAAGTCGCCGAAG-AAGAGGCCGAGGAAGTCGCCGAAG-AAGAGGCCGAGGAAGTCGCCGAAG-AAGAGGCCGAGGAAGTCGCCGAAG-AAGAGGCCGAGGAAGTCGCCGAAG-AAGAGGCCGAGGAAGTCGCCGAAG | Design primers |
| 1797444 | AGAGGCTGAGGAAGTCGCCGAAGA-AGAGGCTGAGGAAGTCGCCGAAGA-AGAGGCTGAGGAAGTCGCCGAAGA | Design primers |
| 1797517 | GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA-GAGGCCGAGGAAGTCGCCGAAGAA | Design primers |
| 1797604 | GCCGAAGAAGAG-GCCGAAGAAGAG-GCCGAAGAAGAG-GCCGAAGAAGAG-GCCGAAGAAGAG | Design primers |
| 1797783 | CGCCGAAGAAGAGGCTGAGGAAAT-CGCCGAAGAAGAGGCTGAGGAAAT-CGCCGAAGAAGAGGCTGAGGAAAT | Design primers |
| 1797879 | CGCCGAAGAAGAGGCTGAGGAAGC-CGCCGAAGAAGAGGCTGAGGAAGC-CGCCGAAGAAGAGGCTGAGGAAGC | Design primers |
| 1798228 | GCCGAGGAAGTCGCCGAAGAAGAG-GCCGAGGAAGTCGCCGAAGAAGAG-GCCGAGGAAGTCGCCGAAGAAGAG | Design primers |
| 1798314 | CGAAGAAGAGGCCGAGGAAGTCGC-CGAAGAAGAGGCCGAGGAAGTCGC-CGAAGAAGAGGCCGAGGAAGTCGC-CGAAGAAGAGGCCGAGGAAGTCGC-CGAAGAAGAGGCCGAGGAAGTCGC-CGAAGAAGAGGCCGAGGAAGTCGC-CGAAGAAGAGGCCGAGGAAGTCGC | Design primers |
| 1798483 | GAAGAAGAGGCTGAGGAAGCCGCC-GAAGAAGAGGCTGAGGAAGCCGCC-GAAGAAGAGGCTGAGGAAGCCGCC-GAAGAAGAGGCTGAGGAAGCCGCC | Design primers |
| 1798580 | AAGAAGAGGCTGAGCAAGCCGCCG-AAGAAGAGGCTGAGCAAGCCGCCG-AAGAAGAGGCTGAGCAAGCCGCCG | Design primers |
| 2087737 | TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA-TTGAAGGGGAGGTAGGGA | Design primers |
| 2246977 | TCTCAATGATGACACTCTGT-TCTCAATGATGACACTCTGT-TCTCAATGATGACACTCTGT-TCTCAATGATGACACTCTGT | Design primers |
| 2441557 | GCCCTTTCTGAA-GCCCTTTCTGAA-GCCCTTTCTGAA | Design primers |
| 2656339 | GCGGCGGCCTTCTCA-GCGGCGGCCTTCTCA-GCGGCGGCCTTCTCA | Design primers |
| 2656390 | GCCTGTTCGGCGGCA-GCCTGTTCGGCGGCA-GCCTGTTCGGCGGCA-GCCTGTTCGGCGGCA | Design primers |
| 2656605 | CTCGGCGGCAGCCTT-CTCGGCGGCAGCCTT-CTCGGCGGCAGCCTT | Design primers |
| 2657755 | GCCTGTTCGGCGGCA-GCCTGTTCGGCGGCA-GCCTGTTCGGCGGCA | Design primers |
| 2753700 | GGAGCTGCCGCTGGGGCATCACCA-GGAGCTGCCGCTGGGGCATCACCA-GGAGCTGCCGCTGGGGCATCACCA | Design primers |
| 2790025 | CGCCGGTGGTGT-CGCCGGTGGTGT-CGCCGGTGGTGT | Design primers |
| 2790128 | GCCGGTGGT-GCCGGTGGT-GCCGGTGGT | Design primers |
| 2863069 | CTGTGCCAAGGGGGC-CTGTGCCAAGGGGGC-CTGTGCCAAGGGGGC-CTGTGCCAAGGGGGC-CTGTGCCAAGGGGGC-CTGTGCCAAGGGGGC | Design primers |
| 2898461 | GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG-GCTTCCGGCTCATGGCTGGCG | Design primers |
| 2907089 | CTTTGGCTGTTTTGGCCG-CTTTGGCTGTTTTGGCCG-CTTTGGCTGTTTTGGCCG | Design primers |
| 2907237 | AGCAGCCGCACCCTT-AGCAGCCGCACCCTT-AGCAGCCGCACCCTT | Design primers |
| 3238664 | GCTTTGCCATGAG-GCTTTGCCATGAG-GCTTTGCCATGAG-GCTTTGCCATGAG | Design primers |
| 3253373 | CCCTCTTGACGG-CCCTCTTGACGG-CCCTCTTGACGG | Design primers |
| 3321380 | TCTTGACGGCCC-TCTTGACGGCCC-TCTTGACGGCCC-TCTTGACGGCCC | Design primers |
| 3414419 | TCTTGACGGCCC-TCTTGACGGCCC-TCTTGACGGCCC | Design primers |
| 3740286 | TCAGCC-TCAGCC-TCAGCC-TCAGCC-TCAGCC-TCAGCC | Design primers |
| 3740361 | GCCTCT-GCCTCT-GCCTCT-GCCTCT-GCCTCT | Design primers |
| 3740469 | GCCTCGCCGTCAGCTCCAGTG-GCCTCGCCGTCAGCTCCAGTG-GCCTCGCCGTCAGCTCCAGTG-GCCTCGCCGTCAGCTCCAGTG | Design primers |
| 3816120 | GTGAGTTCCG-GTGAGTTCCG-GTGAGTTCCG | Design primers |
| 3824039 | CACCCACACCAGCCCGCT-CACCCACACCAGCCCGCT-CACCCACACCAGCCCGCT | Design primers |
| 3886090 | CCCAGCGCAAGCCCCTAACACC-CCCAGCGCAAGCCCCTAACACC-CCCAGCGCAAGCCCCTAACACC | Design primers |
| 3946096 | TGTCTTAG-TGTCTTAG-TGTCTTAG-TGTCTTAG | Design primers |
| 4051416 | TTATGGGGAACCCAGCCGGGG-TTATGGGGAACCCAGCCGGGG-TTATGGGGAACCCAGCCGGGG | Design primers |
| 4066635 | GGTGGTGG-GGTGGTGG-GGTGGTGG | Design primers |
| 4528249 | TCTTCGGCTTCGGGCTCT-TCTTCGGCTTCGGGCTCT-TCTTCGGCTTCGGGCTCT | Design primers |
| 4528304 | CCTCAGCTTCGGGCTCTT-CCTCAGCTTCGGGCTCTT-CCTCAGCTTCGGGCTCTT | Design primers |
| 4528636 | TCTTCCTCGACTTCAGGC-TCTTCCTCGACTTCAGGC-TCTTCCTCGACTTCAGGC-TCTTCCTCGACTTCAGGC-TCTTCCTCGACTTCAGGC-TCTTCCTCGACTTCAGGC-TCTTCCTCGACTTCAGGC | Design primers |
| 4528904 | GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA-GCTCTTCCTCAGCCTCAA | Design primers |
| 4529270 | CTTCGGGCGCAGCTTCTTCCTCGG-CTTCGGGCGCAGCTTCTTCCTCGG-CTTCGGGCGCAGCTTCTTCCTCGG-CTTCGGGCGCAGCTTCTTCCTCGG-CTTCGGGCGCAGCTTCTTCCTCGG | Design primers |
| 4529719 | GGCTCTTCCTCGGCTTCG-GGCTCTTCCTCGGCTTCG-GGCTCTTCCTCGGCTTCG | Design primers |
| 4710107 | ACCCTCTAACAAGCC-ACCCTCTAACAAGCC-ACCCTCTAACAAGCC | Design primers |
| 4710153 | CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA-CCCTCTAACAAACCA | Design primers |
| 4711851 | CTTCCGCTCTTTCCTCCCG-CTTCCGCTCTTTCCTCCCG-CTTCCGCTCTTTCCTCCCG-CTTCCGCTCTTTCCTCCCG-CTTCCGCTCTTTCCTCCCG | Design primers |
| 4712067 | TCTTTCCTCCCGCTTCCGA-TCTTTCCTCCCGCTTCCGA-TCTTTCCTCCCGCTTCCGA | Design primers |
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