Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Bacillus licheniformis DSM 13

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
51255	AAAGATAAGGATAAAGAAAAAGAG	Design primers
187745	TATATACAATATACACAATATGTACAATATACACAA	Design primers
282143	TAGAGTTGAGTCGAGCAGAGAAGAGTACAG	Design primers
413499	TGTCTTTT-TCTCTTTT-TCTCTTTT-T	Design primers
624497	TT-TT-TT-CT-TT-TT-TG-TT-TT-GT-TT-GT-T	Design primers
628321	GACATGGGC-GGCATGGGC-GGCATGGGC-G	Design primers
671067	ACCAAGAACAAGATCAAGATCAAG	Design primers
677727	TGTTTTATCTGTTTTATTCGTTTTATCTGTTTTATT	Design primers
811751	CCCAACGGGAGCGACCGGGCCAACAGGAGCCACCGGCCCGACAGGAGCGACGGG	Design primers
811951	CCACCGGAGCGACGGGTCCGACAGGAGTGACGGGTCCAACGGGAGCGATGGGTCC	Design primers
812013	GCCACCGGAGCCACAGGTGCAACAGGAGCGACAGGTGCAACAGGAGCGACAGGT	Design primers
812342	GGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCAACAGGAGTAACAGGTTCAACGGGAGCAACGGG	Design primers
812715	CCGACAGGAGCGACGGGTCCAACTGGAGCGACAGGTGCAACAGGAGCGACAGGTCCGACCGGAGTGACGGGAGCAACCGGAGCGACGGGTCCGACAGGAGTGACGGGTCC	Design primers
812826	ACGGGAGCCACCGGAGCA-ACGGGAGCCACCGGAGCA-ACGGGAGCCACCGGAGCG-ACGGG	Design primers
813078	ACAGGAGCGACGGGTCCAACAGGAGTAACAGGTCCAACTGGAGCGACAGGTGCAACAGGAGCGACAGGTCCGACAGGAGTGACGGGAGCAACAGGAGCGACGGGTCCGACAGGAG	Design primers
813305	GGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCAACAGGAGTAACAGGTCCAACGGGAGAAACGGG	Design primers
813472	CAACGGGAGCAACAGGAGCAACAGGAGC	Design primers
813501	ACAGGAGCCACAGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCAACAGGAG	Design primers
813612	GGAGCCACAGGTCCGACAGGAGCGACGGGTCCAACAGGAGTAACAGGTCCAACAGGAGCGACAGGTGCAACAGGAGCGACAGGTCCGACCGGAGC	Design primers
814273	CAACGGGAGCCACCGGAGCAACGGGAGCCACTGGCCCGACGGGAGCAACAGGAGC	Design primers
814331	GGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCAACAGGAGTAAC	Design primers
815774	GGCCCGACCGGAGCGACGGGTCCAACGGGAGCGACGGGTCCGACCGGAGCGACAGGCCCGACAGGAGCAACGGG	Design primers
815966	GCAACAGGAGCGACCGGCCCGACAGGAGCGACAGGCCCGACAGGAGCGACAGGC	Design primers
816021	CGACAGGAGCAACAGGAGCGACCGGAGC	Design primers
816134	GGAGCAACAGGAGCGACC-GGCCCGACAGGAGCGACC-GGAGCAACAGGAGCGACC-GGAGCAACAGGAGCGACA-GGAGCGACAGGAGCAACA-GGAGC	Design primers
816422	GGAGCGACAGGAGCGACCGGAGCAACAGG	Design primers
816452	CCAACAGGAGCGACCGGAGCAACAGGAGCGACAGGTCCGACGGGAGCGACCGGCCCGACAGGTCCGACCGGA	Design primers
816560	GCGACAGGAGCGACCGGAGCAACGGGAGCGACCGGCCCGACAGGAGCAACGGGAGC	Design primers
816633	CGACGGGAGCGACAGGAGCGACCGGAGCAACGGGAGCGAC	Design primers
816674	GGCCCGACAGGAGCAACAGGTCCAACAGGAGCGACAGGAGCGACAGGAGCAACGGG	Design primers
816791	GGAGCAACAGGAGCGACAGGAGCAACGGGAGCGACAGG	Design primers
816831	CGACGGGAGCAACGGGAGCGACAGGAGCAACGGGAGCGAC	Design primers
816878	ACAGGAGCA-ACGGGAGCA-ACGGGAGCA-ACAGG	Design primers
816912	CAACAGGAGCGACAGGAGCGACAGGAGCAACGGGAGC	Design primers
816962	GGAGCCACCGGAGCAACAGGAGCGACAGGAGCAACGGGAGCAACGGGAGCGACAGG	Design primers
817061	GGAGCAACAGGAGCGACAGGAGCAACGGGAGCGACAGG	Design primers
817101	CGACGGGAGCAACGGGAGCGACAGGAGC	Design primers
817160	GGAGCAACAGGAGCGACAGGAGCAACGGGAGCGACAGG	Design primers
817397	CCGACAGGAGCAACAGGAGTGACAGGAGCAACGGGAGCGACAGGTCCAACAGGAGCGACAGGAGCGACAGGAGCTACGGGAGCAACAGGA	Design primers
817587	CAACAGGAGCGACAGGAGCAACCGGAGCAACAGGAGC	Design primers
1047216	ATGTCCCGCACAGCTCCAACAGCTGTGTCCCATGCAGCTCCAACAGCTGTGTCCCGCGCAGCTCCAACAGCT	Design primers
1099854	TAA-TAG-TAG-TAA-TAA-TAG-TAG-TAG-TAG-TA	Design primers
1281877	GCGGAGGCTACGGCGGTGGCTACAGCGGCGGCTATGGCGGCGGCTATGG	Design primers
1477681	TGTTTATGTGTATGCTTATGTTTAT	Design primers
1809527	AA-AG-AA-AA-AG-CA-AA-AG-AC-AA-AG-AC-AA-A	Design primers
2007939	ATTTGTTGAAAATATGTTTAAAATTTTTCGAAAA	Design primers
2348250	TCTCAACTCAGCTCATCTCAACTCAT	Design primers
2494111	CATCGCCAGCGCCCTCGCAATCGC	Design primers
2512812	TTTTCTCTGTTTTTTTCTGATTTTCTCGATTTTTC	Design primers
2615447	CCCAGCCAAGCCCGGCGCAGCCGAGC	Design primers
2749297	AACAAATTTTATGAAATTTTCACAATTTTTA	Design primers
3282996	GTTTTTTCATATTTTTGCATATTTTTTCTT	Design primers
4187802	TATATTTTTTTATTTTTTTCTATTATTTTTT	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

51255

AAAGATAAGGATAAAGAAAAAGAG