Microsatellites /Tandem Repeats database

Genome: Streptococcus gallolyticus subsp. gallolyticus ATCC 43143

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
105108ATTTTATAAAAAATGTAAAATAAACTTGACAAAAAATGTAAAGTAAACTTGACAAAAAATGTAAAGTAADesign primers
105178CTATACTAAAAATGTAAAGTAAACTTGACAAAAAATGTAAAGTAAACTATACTAAAAATGTAAAGTCTCDesign primers
136388GAAACAGAAAAAACAGAAGAAAAAGAADesign primers
147737AATAAAGTTTATTAAAGATTAATAAGTTTTDesign primers
219529AAACAAAATTAAAAAATATTAAACAAATATDesign primers
225790AA-AA-TA-AA-CA-AA-AA-AA-AT-CA-AA-AA-AA-TA-CADesign primers
350293GGCGGA-GGCGGA-GGTGGA-GGCGGADesign primers
506040ATAATAAAAAATAAACAAAAATGATAATAADesign primers
522258TTTGATTTTATTTGATGTTGTTTGATTAGADesign primers
675063TCA-TCA-TCA-TCT-TCT-TCA-TCA-TCADesign primers
734322AAGAAAAAGGGAAGAAAGAGGAAAGAAAATGAGDesign primers
899868TTCAAGTTCTTCAAGCTCATCAAGTTCDesign primers
960993TATTAGGATATTAAGAGATTAGGADesign primers
978386ATTTATATATATATTGATATTTTTDesign primers
1447101AGTTCA-AGTTCA-AGCTCA-AGTTCADesign primers
1493306TTTTTAGTA-ATTTTAGTA-ATTTTAGTADesign primers
1937372TGGTGAAGGA-AAGTGAAGGA-AAGTGAAGGADesign primers
1960312TCCTTACTTCGTTACTTCGTTACTDesign primers
2016837GTTTTTCATTGGTTTTTATTATTTTTTATTDesign primers
2081698TTTTA-GGCTC-TGCTC-TGCTC-TGCTC-TGCTC-TGCTC-TGCTC-TGCTC-TGCTC-TGCTC-TGCTCDesign primers
2275792ACTAT-CTGCT-CTGCT-CTGCT-CTGCT-CTGCT-CTGCT-CTGCT-CTGCT-CTGCT-CTGCT-CTGCTDesign primers
2308146CAAGACCAAGTCCAAAACCAAAACDesign primers
2358990TAGTTTTTTTCAATTTTTTTACGTTTTTTTDesign primers

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