Microsatellites /Tandem Repeats database

Genome: Terriglobus saanensis SP1PR4

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
180948GCCACCGGAGCTACCGGAGCCACTGGADesign primers
798336CAGCGAGTCAGCGGGTCAGCGGGTCAGCAAGTDesign primers
894841GTAAGTCA-GCGGGTCA-GCGGGTCA-GCGGGTCA-GCGGGTCA-GCGGGTCADesign primers
943961TTGGCGACATCTTTGGGGACATCTTTGGCGAGATGTDesign primers
1083624GAAGAAGGCTGCGAAAAAGTCTGCCAAGAAGGCGGCDesign primers
1083721AAGAAAGCAGCCAAGAAAGCTGCAAAGAAGGCGGCCDesign primers
1083760AAGGCAGCAAAGAAGGCAGCCAAGAAGGCAGTTAAGDesign primers
1089406AGCGAGTC-AGCGAGTC-AGCGGGTC-AGCGAGTCDesign primers
1096705GGATGGGGCTGGGGATTGCGATGGDesign primers
1690091ACCACGACGACAAGTACAACGACGACCACTACAACGACGACAAGTDesign primers
1796189AGTTTTTAGTTTCTAGTTGTTCGTTTTTAGTTGTTDesign primers
1801181TTC-CTC-CTC-CTC-TTC-TTC-TTC-CTCDesign primers
2223490GACGAT-GAGGAT-GAGGAT-GACGATDesign primers
2322550GGCAGCAGCAGCGGCAGAGGCTGCDesign primers
2322984CTTCTAAAGATGTTCA-ACGCTAAAGATGTTCA-ACGCTAAAGATGTTCA-ACGCTAAAGATGTTCADesign primers
2387032AAGGCGAAGGCCATGGCGACGGCGDesign primers
2871874ATAGACACCAAACAGACACCAAGAAGACACCAADesign primers
2905263CCCGAAGCGCCCCAAGGCGCTTCGAAGCGCDesign primers
3376041GCT-CTT-GCT-GCT-CCT-GCT-GCT-CCT-GCTDesign primers
3425745GTTCCAGTTCTAGATCCAGTACCADesign primers
3562486GAAGAAAGCTGCGAAGAAGGCCGCCAAGAAAACTGCDesign primers
3796877GAACGGTACGGAACGAGACGGAACGGAACGDesign primers
3936909GCTTTCTTCGCAGGAGCCTTCTTTGCAGGGGCTTTCTTTGCTGCADesign primers
3938725GCTGACTTGCTGACCTGCTGACTCDesign primers
4204598GGCCACCACGACCACCACCGCCACCACDesign primers
4255034GCCTCCGTCTCCGCTTCCGCCCCCDesign primers
4273522TCCACCACCACCGGGCCCACCACCTCCCGGTCCTCCACCACCTGGDesign primers
4452629GGCAAAGAAGGCCGTTGCTAAGAAGGCAGTTGCAAAGAAGGCTGTDesign primers
4452718CAGCAAAGAAGACCG-CAGCAAAGAAGACCG-CTGCTAAGAAGACTGDesign primers
4478422AATTTAGGACCGTTTAGGACAAATTAGGCCCATTTGGGACDesign primers
4879747CGCTGCCCCGCTGACCCGCTGACCDesign primers
4964331CGGTTTTTTTAGGTTTTTCTCGGTTTTCTCDesign primers
4970144AGCCGACGAGGGAACCGACAAGGGAGCCGACGAGAGDesign primers

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