Microsatellites /Tandem Repeats database

Genome: Gordonia bronchialis DSM 43247

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
166117CGTTGGTGCCGGAGC-CGTTGGTGCCGGAGC-CGTTGGTGCCGGAGCDesign primers
191013TCGGTG-TCGGTG-TCGGTG-TCGGTGDesign primers
235889TGATCGTGCGCCCGATCCCGT-TGATCGTGCGCCCGATCCCGT-TGATCGTGCGCCCGATCCCGTDesign primers
432821CGGTGCG-CGGTGCG-CGGTGCG-CGGTGCGDesign primers
485089TCTGGCGCTGACGTTGA-TCTGGCGCTGACGTTGA-TCTGGCGCTGACGTTGADesign primers
613115GCGAAGAAGACGACA-GCGAAGAAGACGACA-GCGAAGAAGACGACADesign primers
798174CGGTCCCGAGCC-CGGTCCCGAGCC-CGGTCCCGAGCC-CGGTCCCGAGCC-CGGTCCCGAGCCDesign primers
798256CCCGAA-CCCGAA-CCCGAA-CCCGAADesign primers
1010334GGGAGTCGTGGCTCGACCAGTGGTG-GGGAGTCGTGGCTCGACCAGTGGTG-GGGAGTCGTGGCTCGACCAGTGGTG-GGGAGTCGTGGCTCGACCAGTGGTGDesign primers
1530612CCGCCGGTC-CCGCCGGTC-CCGCCGGTCDesign primers
1587627CGGATCCTTCAGCGT-CGGATCCTTCAGCGT-CGGATCCTTCAGCGTDesign primers
1841361ACCTCGAAGTCCGGC-ACCTCGAAGTCCGGC-ACCTCGAAGTCCGGCDesign primers
2001421TCGGTG-TCGGTG-TCGGTG-TCGGTG-TCGGTGDesign primers
2186631CCGACGGCACCGGAAGATGCG-CCGACGGCACCGGAAGATGCG-CCGACGGCACCGGAAGATGCGDesign primers
2189248CGGATTCCGCGGCGGAGGCAT-CGGATTCCGCGGCGGAGGCAT-CGGATTCCGCGGCGGAGGCATDesign primers
2256502GCCCCAGCCCGGACA-GCCCCAGCCCGGACA-GCCCCAGCCCGGACADesign primers
2387476GCAGGGGAGTTGGGC-GCAGGGGAGTTGGGC-GCAGGGGAGTTGGGC-GCAGGGGAGTTGGGCDesign primers
2517284GAGATCCCTGCCCG-GAGATCCCTGCCCG-GAGATCCCTGCCCGDesign primers
3326999GGTCGGCGT-GGTCGGCGT-GGTCGGCGTDesign primers
3359467TATCGG-TATCGG-TATCGG-TATCGG-TATCGGDesign primers
3522918TGCATCAACCGGAC-TGCATCAACCGGAC-TGCATCAACCGGACDesign primers
3673466CCCCCGTCTCGTTGG-CCCCCGTCTCGTTGG-CCCCCGTCTCGTTGG-CCCCCGTCTCGTTGGDesign primers
3822921AAACGCGGTGCTGTCGGCGCG-AAACGCGGTGCTGTCGGCGCG-AAACGCGGTGCTGTCGGCGCGDesign primers
4239538TCAGCGGTCGGGTTC-TCAGCGGTCGGGTTC-TCAGCGGTCGGGTTC-TCAGCGGTCGGGTTCDesign primers
4343434GGGCCACCG-GGGCCACCG-GGGCCACCGDesign primers
4438316GTCTATCCATCTGG-GTCTATCCATCTGG-GTCTATCCATCTGGDesign primers
4459591CCGAATCTGTTGTCC-CCGAATCTGTTGTCC-CCGAATCTGTTGTCCDesign primers
5039505CGGTGT-CGGTGT-CGGTGT-CGGTGT-CGGTGTDesign primers
5047509TCGTCATCG-TCGTCATCG-TCGTCATCGDesign primers
5130227TGCTGTTCTCGACCC-TGCTGTTCTCGACCC-TGCTGTTCTCGACCCDesign primers
5156474CCGCGTGATGAATGGGCG-CCGCGTGATGAATGGGCG-CCGCGTGATGAATGGGCGDesign primers

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