Microsatellites /Tandem Repeats database

Genome: Cryptobacterium curtum DSM 15641

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
55865GTAGCTAGGTAACTAGGTAGCTAGDesign primers
205513TCGC-AGGC-AGGC-AGGC-AGGC-AGGC-AGGC-AGGC-AGGCDesign primers
234688CCAGGTGT-TCAGGTGT-TCAGGTGTDesign primers
252248GCACCA-GCACCA-GCGCCA-GCACTADesign primers
298189TGGTGCTGATGCTGGCGCTGCTGCDesign primers
338265TATCCT-TATCCT-TCTCCT-TATCCT-TCTCCTDesign primers
347627CGTGTGCCAAAATGTGCCAATGTGTGCCAADesign primers
353809GATGTCGGTATAAATGACGGTATAAATGTCGGTATADesign primers
423959CATCCA-CATCTA-CATCTA-CATCTADesign primers
448460AATGACAATTACAATGGCTATGACDesign primers
522998GGTAACGGGAACGATAACGGTAAADesign primers
580029CAAACAGGTATAAACCGGTACAAACGGATADesign primers
668678ATAAAGATAAGGGTAAAGATAAAGDesign primers
673347TTCTGA-GCCTGA-GCCTGA-GCCTGA-GCCTGA-GCCTGADesign primers
703888CAGGCGTTCCTCCAACAGACGTTGCTTCAACGGGCGTTCCCCCAADesign primers
846474CGAATTTGAATTCGAGTTTGAATTDesign primers
997686TAAA-GTAA-GTAA-GTAA-GTAA-GTAA-GTAA-GTAA-GTAADesign primers
997723TTGA-TAGA-TAGA-TAGA-TAGA-TAGADesign primers
1081667GTAG-CTGC-CTGC-CTGC-CTGC-CTGC-CTGC-CTGC-CTGC-CTGC-CTGC-CTGCDesign primers
1224598ATCT-AGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGATDesign primers
1242249TGTT-AGTT-AGTT-AGTT-AGTT-AGTTDesign primers
1295923GTAGGCTCACTGCTAGTAGACTCACCACTACTAGGCTCACTGCTCDesign primers
1377737CACCAACACCATCAGCAATACCAADesign primers
1396284CACGTATCCCACGTATTCCACGTATCTDesign primers
1472044TACGTTATGTTTCGTAACGTTTCGTAACGTDesign primers
1499614TTCATCTGCTTCACCTGCTTCATCGGCDesign primers
1539202CACCAAGAGCACCAGGAGCATCAAGAGDesign primers

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