This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 47436 | CTTCAGACAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACTTCAGACAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACTTCAGACAGTGAATCAACTTCAGATAGCGAATCAACTTCAGACAGTGAATCAACTTCAGACAGCGAGTCAC | Design primers |
| 47742 | CTTCAGACAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACATCAGATAGCGAATCAACTTCAGACAGTGAATCACAATCAGATAGCGAATCAACTTCAGACAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACATCAGACAGTGAATCAC | Design primers |
| 47923 | ATCAGATAGCGAATCACAATCAGACAGTGAATCACAATCAGATAGCGAATCAAC | Design primers |
| 47978 | TCAGACAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAGTCAACTTCAGATAGCGAATCAACTTCAGACAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCACAATCAGATAGCGAATCAACTTCAGACAGTGAATCAACTTCAGACAGCGAGTCACAATCAGACAGTGAATCACAATCAGATAGCGAGTCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACTTCAGACAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCACAATCAGACAGTGAATCACAATCAGATAGCGAGTCAACATCAGACAGTGAATCAACATCAGACAGCGAGTCACAATCAGATAGCGAATCAACTTCAGACAGTGAATCAACTTCAGACAGCGAGTCACAATCAGATAGCGAGTCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAGTCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACATCAGACAGTGAATCAACTTCAGATAGCGAATCACAATCAGATAGCGAATCAACATCAGACAGTGAATCACAATCAGATAGCGAATCAACTTCAGACAGCGAATCACAATCAGATAGCGAGTCAACTTCAGACAGCGAATCACAATCAGATAGCGAGTCAACATCAGACAGTGAATCAACATCAGACAGCGAATCACAATCAGATAGCGAGTCAACTTCAGACAGCGAATCACAATCAGATAGCGAGTCAACATCAGACAGTGAATCAACATCAGACAGCGAGTCACAATCAGATAGCGAATCAACTTCAGACAGTGAATCAACATCAGACAGCGAGTCACAATCAGATAGCGAGTCAACA | Design primers |
| 52169 | TATATTACTTTATTTTATTTTAAACTACTT | Design primers |
| 54061 | TATTTTATTATATTTGATTTCATTT | Design primers |
| 105435 | TATTTTTAGTTTTAATTTTCTTTT | Design primers |
| 181125 | ACAACAAAAGACAATAAAAAACAAGACAAG | Design primers |
| 296616 | AA-GA-AA-AA-GT-AA-AA-CA-AA-AA-TA-AA | Design primers |
| 337588 | AAAAATAAAAAAGATAAAAAGAATAAA | Design primers |
| 501573 | TCAACTTCATCATCTTCATCAGCTTCA | Design primers |
| 783411 | TTGTAGTTATTATAGTTATTGTAATTA | Design primers |
| 856708 | AAC-AAT-AAT-AAT-AAC-AAC-AAC-AAT | Design primers |
| 1021582 | TGCTTCTGGTTCTGTTTCTACTTC | Design primers |
| 1052350 | CAA-TAA-CAA-TGA-TAA-TAA-AAA-TAA | Design primers |
| 1071633 | AATTGTAA-TATTGTAA-TATTGTAA | Design primers |
| 1080745 | AATAAAAATAGAAATTAAAATAAA | Design primers |
| 1123784 | TTTGAT-TTTGAT-CTTGAT-CTTGAT | Design primers |
| 1361325 | AATGAATCAAAATTAATGAAAATATATCAA | Design primers |
| 1380889 | ATTAAACATATTAAACGTTTTAAACAT | Design primers |
| 1414612 | TATTTTTATCTTCATTTTTATTTG | Design primers |
| 1457091 | GGTGCAGCTGGTGCGGCTGGCGCAGCT | Design primers |
| 1696592 | TTT-GTT-GTT-TTT-ATT-ATT-TTT-ATT-GTT-CTT-ATT-GTT-TTT-GTT-ATT-TTT-ATT-ATT | Design primers |
| 1825043 | TTTTTTGACGTTTTTAGTCGTTTCTTGAGG | Design primers |
| 2227801 | ATCTTCATTTTCATCTTGGTCTTC | Design primers |
| 2248981 | AAAATAAAAATGAAGATAACAATA | Design primers |
| 2328830 | CAAAAAATAAAACAAAATAACAACAAAGAA | Design primers |
| 2359042 | TGGTTT-TGGTTT-AGGTTT-GGGTTT-AGGTTT | Design primers |
| 2424671 | ATCGGCGTCTGCATCAGCGTCTGAGTCAGCGTCTGC | Design primers |
| 2424726 | TCTGCGTCGCTATCTGCATCTGCATCGCTGTCCGCATCTGCATCGCTGTCCGCATCTGCGTCACTATCTGCA | Design primers |
| 2424822 | TCGCTATCTGCATCTGCATCACTGTCGGCATCTGCATCACTGTCGGCATCTGCA | Design primers |
| 2424877 | CGCTGTCTGAGTCTGAATCGCTATCTGAATCAGAATCGCTATCTGAATCAGAATCGCTATCTGAGTCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTATCTGAATCAGAATCGCTATCTGAGTCTGAATCGCTATCTGAATCAGAATCGCTATCTGAGTCTGAATCGCTATCTGAATCAGAATCGCTATCTGAGTCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGT | Design primers |
| 2568850 | AATAAG-AATAAG-ATTAAG-AATATG | Design primers |
| 2616920 | TTTTTTGACGTTTTTAGTCGTTTCTTGAGG | Design primers |
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