Microsatellites /Tandem Repeats database

Genome: Francisella noatunensis subsp. orientalis LADL--07-285A

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
117141TAAAAGATGTTAAAGATGTTAAAGATGDesign primers
169608TGCTCT-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGG-TACAGGDesign primers
169729ACAGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGG-TCTGGGDesign primers
189408TT-TT-TT-CC-AT-TT-TG-TT-CC-TT-TT-TT-AT-CT-ATDesign primers
192912TAAAAAGCTTTGAAGAGCTTGAAAATGCTTDesign primers
198933CTTTGT-GGCTGT-GGCTGT-GGCTGT-GGCTGT-GGCTGT-GGCTGT-GGCTGT-GGCTGTDesign primers
236754ATTCTCAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAG-ATAATAAAGDesign primers
481988AATACTT-TAAAGGT-TAAAGGT-TAAAGGT-TAAAGGT-TAAAGGT-TAAAGGT-TAAAGGT-TAAAGGTDesign primers
569926TAATTATATATTTATATTATTATADesign primers
578448ATAAAAAA-GTAAAAAA-GTAAAAAADesign primers
775578TATATATT-GATATATT-GATATATTDesign primers
805396TTTTTCTATTTTTATATTTTGCTADesign primers
812044TCTAAAGCTAAATGTAAATCTATADesign primers
899879TTGTTGTGTTTTGTGTTATTTTATTDesign primers
1163070AAAACGAAACAAAACAAAATAAAAADesign primers
1396283TTGGTGATGGTGCTGGTGTTGTTGDesign primers
1437431AAAAAAGAAAAACAAAAAAGAAAAADesign primers
1600258AGGAAAAACAATGCAAAACAATGAAAATCADesign primers
1687664TCAGCAGCTTCAGCAGCAGCAGCTGGAGCAGCAGCAGCAACAGCADesign primers
1772610TGTTTATTTATTTTTATTTAGGTTGATTTADesign primers
1821928GCCAAG-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACT-ACAACTDesign primers

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