Microsatellites /Tandem Repeats database

Genome: Streptococcus pasteurianus ATCC 43144

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
26407AAGAAGCAGCTGAACAAGCAGCAGAAGAAGCAGCTGDesign primers
282893GGCGGA-GGCGGA-GGTGGA-GGCGGADesign primers
455649TTTGATTTTATTTGATGTTGTTTGATTAGADesign primers
512734AAAGCAGAAGCAGAAGCAAAAGCTDesign primers
576213AGCTCATCA-AGCTCATCA-AGTTCATCADesign primers
1017318CT-TT-AT-CT-TT-GT-TT-TT-AT-TT-TT-ATDesign primers
1080688TTTTATTAATTTTGACTAATATTTATTAAADesign primers
1275064TACAAATATAAATATAAATACAATDesign primers
1276116TAAATATATTTATATATATAATTATAAATATTTTTADesign primers
1510990ATTTGTTGAA-ATTTGTTGAA-ATTTTCTGAADesign primers
1807681TGTTACCT-CCTTACTT-CGTTACTT-CGTTACTT-CGTTACTT-CGTTACTTDesign primers
1915589TTAGG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTGDesign primers
2041274CAAGACCAAGTCCAAAACCAAAACDesign primers
2083468CTAGGATTTTCTCGTATTTTCTAGTATTTCDesign primers
2097985AAAATTACC-AAAATTACC-AAAGTTACCDesign primers

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