Microsatellites /Tandem Repeats database

Genome: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
50455CCACCGAGCCCGCCGGAC-CCACCGAGCCCGCCGGAC-CCACCGAGCCCGCCGGAC-CCACCGAGCCCGCCGGACDesign primers
364466CGCCC-CGCCC-CGCCC-CGCCC-CGCCCDesign primers
434762GCTGGT-GCTGGT-GCTGGT-GCTGGTDesign primers
441609GCGGGG-GCGGGG-GCGGGG-GCGGGGDesign primers
525314GCCTCGCCA-GCCTCGCCA-GCCTCGCCA-GCCTCGCCA-GCCTCGCCA-GCCTCGCCA-GCCTCGCCA-GCCTCGCCA-GCCTCGCCADesign primers
761780CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTG-CTGCGGTTGDesign primers
1052224CGAGCGGTGCTGGGTT-CGAGCGGTGCTGGGTT-CGAGCGGTGCTGGGTT-CGAGCGGTGCTGGGTT-CGAGCGGTGCTGGGTT-CGAGCGGTGCTGGGTT-CGAGCGGTGCTGGGTTDesign primers
1464992CCCGAGCCG-CCCGAGCCG-CCCGAGCCG-CCCGAGCCGDesign primers
1465502TCGTCGTCCTCG-TCGTCGTCCTCG-TCGTCGTCCTCG-TCGTCGTCCTCGDesign primers
1465551CGTCCTCGT-CGTCCTCGT-CGTCCTCGTDesign primers
1465579GTCCTCGGT-GTCCTCGGT-GTCCTCGGTDesign primers
1486060GTTGGT-GTTGGT-GTTGGT-GTTGGT-GTTGGT-GTTGGT-GTTGGT-GTTGGT-GTTGGT-GTTGGTDesign primers
1530305GAGTCGACC-GAGTCGACC-GAGTCGACCDesign primers
1586332CCGTGCAC-CCGTGCAC-CCGTGCAC-CCGTGCACDesign primers
1846853CCGAC-CCGAC-CCGAC-CCGAC-CCGACDesign primers
1862549CCCGAG-CCCGAG-CCCGAG-CCCGAGDesign primers
2006317TGAGCGG-TGAGCGG-TGAGCGG-TGAGCGG-TGAGCGG-TGAGCGG-TGAGCGG-TGAGCGGDesign primers
2303795GCCGTG-GCCGTG-GCCGTG-GCCGTGDesign primers
2899998GGCTCC-GGCTCC-GGCTCC-GGCTCCDesign primers
2921124CGGCGACCA-CGGCGACCA-CGGCGACCADesign primers
3046471ACGGCC-ACGGCC-ACGGCC-ACGGCCDesign primers
3231893CCGGGGTTG-CCGGGGTTG-CCGGGGTTGDesign primers
3831201TCGCCT-TCGCCT-TCGCCT-TCGCCT-TCGCCT-TCGCCTDesign primers
3943221GGCGACCCG-GGCGACCCG-GGCGACCCG-GGCGACCCGDesign primers
4002585ACCGCA-ACCGCA-ACCGCA-ACCGCA-ACCGCADesign primers
4179450CCGCAC-CCGCAC-CCGCAC-CCGCAC-CCGCACDesign primers
4247704GGGGCCTCC-GGGGCCTCC-GGGGCCTCCDesign primers
4260896GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCC-GCACCCCDesign primers
4822916CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTA-CGGCTADesign primers
5099742CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGGDesign primers
5125115GCACCA-GCACCA-GCACCA-GCACCA-GCACCADesign primers
5212130GGCGGTTCG-GGCGGTTCG-GGCGGTTCGDesign primers
5525507TCCGCGTCC-TCCGCGTCC-TCCGCGTCCDesign primers
5544738CGACCGG-CGACCGG-CGACCGG-CGACCGGDesign primers
5553081CAGGAGGTGA-CAGGAGGTGA-CAGGAGGTGADesign primers

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