Microsatellites /Tandem Repeats database

Genome: Salmonella enterica subsp. enterica serovar Enteritidis str. P125109

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
68237TTT-TAA-TTA-ATT-TAA-TTA-TTT-TTA-TTADesign primers
199490GGCGAGATGGATCATGGCAACATGGATCACAGCGGGATGAATCATDesign primers
246612CGGCGGTAACGGCGGCAACGGCGGTCADesign primers
360998TGCTATCGCTATTACTATTGCGATDesign primers
485709GCGAAAGAGAAAGCGGAAGCGGAADesign primers
533267AGCGAATAT-GGCGAATAT-GGCGAATATDesign primers
602078GACCCTCT-TACCCTCT-TACCCTCTDesign primers
635098TGGTGGTGGTCGTGGTGCTGGCGGDesign primers
886835TTGCGG-CTGCGG-CTGCGG-TTGCGGDesign primers
1039232CCGGAG-CCGGAG-CCGGTG-CCGGAGDesign primers
1423609TTATGCTGGATTATCCTGGCGTATGCGGGADesign primers
2345586GCAGCGCCAGCAGCACCAGCGGCGCCADesign primers
2504792TTGTTGG-TAGTTGG-TAGTTGG-TAGTTGG-TAGTTGGDesign primers
2570420ACGCCGTCGCACGCCGCCTCACGCAGTTGCDesign primers
2934956TATGGGTTTATGTGAGTTTATAAGGGTTTTDesign primers
3024065GTTGTGATGTTGTGTTGTTGTGTTDesign primers
3073226CATCAC-GACCAT-GACCAT-GACCAT-GACCAT-GACCAT-GACCAT-GACCAT-GACCATDesign primers
3113897CCGGCGCTGGCGCCGGTGCTGGCGDesign primers
3352242TCGCTT-TCGCTT-TCTCTT-CCGCTTDesign primers
3353009TCGCCGCCGTCGCCGCCATCACCGCCGDesign primers
3603255ATGCAGACGCAGATGCAAACGCAGDesign primers
3693629CACCAG-CACCAG-CGCCAG-CAGCAGDesign primers
3891075GCAGCGCCAGCAGCACCAGCGGCGCCADesign primers
3961222TGATCATGTTCACGATCATGACCADesign primers
4119021TCATTATAATTAACATTATCAATADesign primers
4211680CGCGGTAAATCTCGATAAATGGCGGTAAAADesign primers
4432009GGTGGCATGGGTGGTATGGGTGGTATGGGCGGCATGDesign primers
4617689AGATGCC-GGATGCC-GGATGCC-GGATGCC-GGATGCCDesign primers
4685815CACCACCACCATTACCACCATCACDesign primers

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