Microsatellites /Tandem Repeats database

Genome: Comamonadaceae bacterium CR

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
380235TGTGGTGTGTGA-TGTGGTGTGTGA-TGTGGTGTGTGA-TGTGGTGTGTGADesign primers
880809AGGCGATAAAT-AGGCGATAAAT-AGGCGATAAAT-AGGCGATAAATDesign primers
920297CTCTTTCCC-CTCTTTCCC-CTCTTTCCCDesign primers
1051929GCAGGA-GCAGGA-GCAGGA-GCAGGADesign primers
1071668CTGATAACA-CTGATAACA-CTGATAACADesign primers
1083843AGAAGGAAAAGC-AGAAGGAAAAGC-AGAAGGAAAAGCDesign primers
1167698CTGCTGCCT-CTGCTGCCT-CTGCTGCCTDesign primers
1464830CCTTGTTGTATA-CCTTGTTGTATA-CCTTGTTGTATADesign primers
1670568ACCGGGCAAGTA-ACCGGGCAAGTA-ACCGGGCAAGTADesign primers
1673284GAAGTCACCCCC-GAAGTCACCCCC-GAAGTCACCCCCDesign primers
1686719CCCGTATTC-CCCGTATTC-CCCGTATTCDesign primers
1704100TTCTTGGG-TTCTTGGG-TTCTTGGG-TTCTTGGG-TTCTTGGG-TTCTTGGG-TTCTTGGG-TTCTTGGGDesign primers
2188445ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTTDesign primers
2314968GTGGCA-GTGGCA-GTGGCA-GTGGCADesign primers
2403765TTGGGGCA-TTGGGGCA-TTGGGGCADesign primers
2805482AAGGAACGTGGAAC-AAGGAACGTGGAAC-AAGGAACGTGGAACDesign primers
2831272CGAATA-CGAATA-CGAATA-CGAATADesign primers
2910069GGCAGAC-GGCAGAC-GGCAGAC-GGCAGACDesign primers

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