Microsatellites /Tandem Repeats database

Genome: Blattabacterium sp. (Blatta orientalis) str. Tarazona

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
2259TAAAGAATAATAGAGAATATGAAAAAATAADesign primers
7266TATTTCATTTTATTTTATTATATCTDesign primers
61833TATTTTGTTTTTTTTCATTTTTTTTDesign primers
100567TAAATCTAAACCTAAATTTAAAACDesign primers
108824AAAAAAAAATAAATAACAAAAAGAADesign primers
129613TCCATATTTTTTGCAAATTTTTTGCAAATTTTTDesign primers
168233AA-AT-AT-AA-GT-AT-AA-AA-AT-AA-AT-ATDesign primers
169893AACCTCTCTT-CTCCTCTCTT-CTCCTCTCTT-CTCCTCTCTT-CTCCTCTCTTDesign primers
215785TGAATGTGTTTGCATATGTTAGAATGTTTTDesign primers
229940TTTAAATTTAGAATTAAATTTTAADesign primers
244261ATAAAAAAGTAAAAAAAAATAGAAAAAAATDesign primers
248436AA-AA-AA-AA-CA-AA-AT-AT-AA-AA-AA-AA-CA-AA-AADesign primers
255567AAAAGTAGAAGTAAAGGTAAAAGGDesign primers
274322ATTTCTTTTATTTTTTTTATTTCTATTDesign primers
338548ATATAAAATAAATATGAAATGAAAATAATATAADesign primers
371645AGAAAAAAAGATAAAAAGAAAAGADesign primers
412085TTTTTCTTTTTTTTCTATTTTTTTADesign primers
429585TTTTTTAATTTTTTTTGAATTTTTTTTATGDesign primers
584248AGAAAAAAGAAAAGAAAAAAAGGAAAAADesign primers
589454TTTTTATTTTTTTTTCTATTTCTADesign primers
612019AAATTTATTTTTCTATTTATTTTTTAAATTATTTTTDesign primers

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