Microsatellites /Tandem Repeats database

Genome: Brucella suis VBI22

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
28827TCTTCCTCTTCGGCTTCCTCTTCADesign primers
37538AATGGCGGGAGAAAGGGCGGGAGAAATGGCCAGAGADesign primers
38267TAAGGGAGTAAGGGAATAGGGGAGTAAGGGGGDesign primers
38356TCCCCTATTCCCTTATTCCCCTACTCCCCTAADesign primers
62707TAAGGCAATAGGGCAATAAGGCAGDesign primers
62736TAAGGGAATAGGGGAATAAGGGAGDesign primers
62805CTTCACTG-CCCTACTG-CCCTACTG-CCCTACTG-CCCTACTG-CCCTACTGDesign primers
63367AGGGCAACAGGGCGACAGGGCAATDesign primers
64653TAAGGGAATAGGGGAATAAGGGAGDesign primers
64721CTTCACTG-CCCTACTG-CCCTACTG-CCCTACTG-CCCTACTG-CCCTACTGDesign primers
86927TAAGGGAATAGGGGAATAAGGGAGDesign primers
86998CACTGCCC-TACTGCCC-TACTGCCCDesign primers
438759TAAGGGAATAGGGGAATAAGGGAGDesign primers
438829TTACTGCC-CTACTGCC-CTACTGCCDesign primers
548667GGCAGTAAGGCAATAAGGCAGTATDesign primers
548788TGCCCTACTGCCTTACTGCCCTATDesign primers
558879AGGGGAATAAGGGAATAGGGGAATAGGGGAGTDesign primers
559046GCCCTACAGCCCTACTGCCCTAAADesign primers
621341TACTGCCTTACTGTCTTACTGCCCDesign primers
736213TTAGGGGA-ATAGGGGA-ATAGGGGA-ATAGGGGADesign primers
736308TTTTTTCC-CTTACTCC-CTTACTCC-CTTACTCC-CTTACTCC-CTTACTCCDesign primers
846733GCGCGGGCGCTGGCGCGCGCGCTGDesign primers
1022113CCGCATCGGCCGCACCGGCCGCAACGGDesign primers
1214832GCGGCAGCAGCAGGGGCAGCGCCACCGGCAGCAGCADesign primers
1399564GTAAGGGC-AGTAGGGC-AGTAGGGC-AGTAGGGC-AGTAGGGC-AGTAGGGCDesign primers
1399653TACTCCCCTACTCCCTTATTCCCCDesign primers
1399690TACTGCCTTACTGCCCTATTGCCTTACTGCCTDesign primers
1464576TTTCGGTCATGGTTTCGGTCACGGCTTTGGTCATGGDesign primers
1483892CCGGCTCCGCCTCCGGCTTCGGCTDesign primers
1699801TGGCCGCGATTCTGGTTGCCACGATGCTGGTTTCCACGATTCTGGDesign primers
1881862CGCAGAGTTAGTGGGCAGAGCTAGTGGGCAGAGTTAGTGDesign primers
1903846ATGAAACCCGCAATGAAACCTGTAATGAAACCCGGCDesign primers
1944147ACCATGACCATCATCATGACCACGDesign primers
1960836TGATCGTTATGATGATCGTGATGGTGATCGTGGTGADesign primers
1995462GGCGCGCCGGCGCACCGCCGCGCCDesign primers
2061917TGTAATATTAGTGTCATATGAGTGTAATATACGDesign primers
2083629GCGGGCCCATGAGCGGGTCCTTGAGCAGGCCCTTGADesign primers

Please help us improve this resource by reporting problems, suggestions etc.