Microsatellites /Tandem Repeats database

Genome: Lactobacillus delbrueckii subsp. bulgaricus ND02

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
56537TTTTTTAC-TTCTCGTC-TTCTCGTC-TTCTCGTC-TTCTCGTC-TTCTCGTC-TTCTCGTC-TTCTCGTC-TTCTCGTCDesign primers
137228CTTCAACCTCAACTGCAACTACAADesign primers
152841TTTCTTACTAGATTTTTTTCTAGACTTCTTGCTAGATTTCTTACTAGTDesign primers
191163GTCTGTTGTCTATTGTTTGTTGTCTGTCDesign primers
196476AGGTAGTAAGAAACTAATTAGCAAGAAACTAATTAGCAAGAAACTDesign primers
275268TTTCTTTAGTCA-CTTCTTTAGTCA-CTTCTTCAGTCA-CTTCTTTAGTCGDesign primers
281723ATGAT-TTGAT-TAGAT-TTGAT-TTGAT-TTGATDesign primers
310375GACGACAGTGACGCTGACGAAGATGACGCTGACGACAATTACGATDesign primers
426196TATAGTCAT-GATAGTCAT-GATAGTCATDesign primers
428240GAAATGGAAAGGGACATGGAAAAGDesign primers
494231AAGAAGAAAAAGAAGTCC-AAGAAGAAAAAGAAGTCC-AAGAAGAAAAACAAGAACDesign primers
544330AAGAAAAGGAAAGGAAAGGAAATAADesign primers
804425AGATGCACA-ACATGCACA-ACATGCACA-ACATGCACADesign primers
1249810ATATAGAGAAGTATAGAGAAAAACAGAGAADesign primers
1510129CATCATCATCTA-GCTCATCATCTA-GCTCATCATCTADesign primers
1533707TTCTTCTTCTACTACTTCTTCTTTDesign primers
1603843TTACTTTGTTTCTTTGTTACTTTGDesign primers
1714365TATATTCCTTTTTATTCCTTTTTATTCTTTDesign primers
1733783CAGCTGCGGCTGCAGGTGCAGCTGDesign primers
1825482ACTACTAAGAAGACTACCAAGAAGGCCACTAAGAAGDesign primers
1833608AAAAAATAGAAAAATATCGAAAGAAATAGADesign primers
1853521TTTTCGATTCCTTTCTATTCCTTTCTATTCDesign primers
1857197TAGCCTTCTTTGCAGCCTTCTTAGCAGTCTTAGCAGCCTTCTTGGTGTTCTTAGCAGCCTTCTDesign primers
1857418TTCTTAGTTGACTTCTTAGTGGTCTTAGCTGCCTTCTTGGTGTTCTTAGCAGCCTTCTTAGTTDesign primers
1863322TAGTTTCGG-CAGTTTCGG-CAGTTTCGGDesign primers
1914296ACAAGGAAAAGAAGGAAAAGAAGGAAADesign primers
1977186ATGTTGTT-TTGTTGTT-TTGTTGTTDesign primers
1989747GAAGCTGCTGCTAAGAAGGCTGCTGCTAAGAAAGCCGCCGCTAAGDesign primers
2070638AATTTTTTTGGCTTTTTTTGAATTTTTTCGDesign primers

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