Microsatellites /Tandem Repeats database

Genome: Rothia dentocariosa ATCC 17931

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
179645GGCTGACCGGGCTGGCCGGGCTCACCGDesign primers
179677ACCAGGCTGACCGGGCTGACCAGGCTGDesign primers
179720GTACCAGGCTGACCGGGC-TGACCAGGCTGACCGGGC-TGACCGGGCTGACCGGGCDesign primers
179792GTGCCAGGCTGACCGGGC-TGACCAGGCTGACCGGGC-TGACCAGGCTGACCGGGCDesign primers
478069GCGCGTAACAGCGCATAAGAGCGGGTAAAADesign primers
501598AAACCAGTCAGCAAACCGGCCAGCGAACCAGTCAGCDesign primers
997286GCCCTGCTGGCCCTGTTGGCCTTGCTGDesign primers
1083530ATATTATTTTATAATAAATTATATADesign primers
1093445ATGCTG-ATTCTG-ATTCTG-GTGCTGDesign primers
1144192GGCGGCGGCTACAGCGGTGGCGGCAACGGCGGCGGCGGCAACTACDesign primers
1383751TTTTTTTTTGTTGTTTGTTTTGTTTDesign primers
1402344GCAGCAACAGCAGCAGCCTCAGCADesign primers
1501791TTTTACACAGGTTCTACACAGCTTAAACACAGGDesign primers
1614738TCCTGCTTAGGCTGCTCTTGCTTGGGCTGTTCCTGCTTGGGGTCCDesign primers
1633607TCATCGTCGTCGTCATCCTCATCADesign primers
2404508GACCGGTGTGGGGTTGACCGGAGTAGGGGTTACCGGTGTGGGATTDesign primers

Please help us improve this resource by reporting problems, suggestions etc.