Microsatellites /Tandem Repeats database

Genome: Mycoplasma crocodyli MP145

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
5626AAAAAATAAAAAAGATAAAAACAAADesign primers
35754CT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-ATDesign primers
56193TAGGTGTTT-CAGGTGTTT-CAGGTGTTTDesign primers
71215TATTTT-TATTTT-TATATT-TATTTTDesign primers
83490AGTAAAAAAGTATAAAAGTTAAAADesign primers
108659TAAAAAATAAGTAAAAAAAATGAAAAAAATAACDesign primers
140747AGCAGCAGCTGCAGCAGCAGAAGCDesign primers
174352ATGTTTTCATATTTTTCCATATGTTTTCATDesign primers
349743TTTATTTTAATTATTTTATTTGTTTTADesign primers
357165TG-AC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
363919ATT-ATT-ATT-CTT-TTT-ATT-ATT-TTTDesign primers
367412ATTTTATTTTTATTTTTAATATTADesign primers
437720TTTTCAATTTCATTTTCTTTTTTADesign primers
442614TATTTGTTTAAACTTGTTTATAATTGTTTTDesign primers
451798AAAATCAAATAAAAGATAATAAATTDesign primers
479446TAAAATTACAATTAAAAGTAATATDesign primers
491782AAA-TAC-AAA-AAC-AAC-TAC-AAC-TACDesign primers
507942TTTTTAACATTTTAAACATTTTTAGCADesign primers
527277ATTTTAAATATTTTTAGATAAGTATAAATADesign primers
571912TTA-TAA-TAA-TTA-AAA-TAA-TTA-TCA-TAADesign primers
622121AAATTAAAATAAGTTAATTTATATTDesign primers
630982ACCAGTTACACCAGTGACCCCAGTTACDesign primers
651407TATAATTTTATAAAATTTTTAATTATTTTATATAATTTCADesign primers
710268TT-TA-TT-TT-AC-TA-TA-TT-TT-AT-TT-TT-TDesign primers
781056TGGACTTGATGGAATTGATGGAATTGADesign primers
828857TAGCTGTAAGCT-CTGCTGTAAGCT-CTGCTGTAAGCTDesign primers
929809CAATTTCTTTAATTTCTTCAATTGCTTDesign primers

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