Microsatellites /Tandem Repeats database

Genome: Streptococcus suis SC84

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
128958TG-AA-AA-TA-TA-GA-AA-AA-TA-TA-GA-AA-AA-TA-TADesign primers
347971GACTTGAATTGACTCGACTTGATTTDesign primers
485742TTGTTTTTTCTTTGTTTTTCGTATGTTTTTTCADesign primers
659527ACCAT-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCA-GAGCADesign primers
800838AATGATAGAAAATGATTGACAATGGCAGAADesign primers
960692TCACTCCCTTCAGTTTCACTATATTCAGTTTCACTTCCTTCAGTCDesign primers
999750AATTTATCAGTG-AATTTATCAGTG-AATTTGTTAGTGDesign primers
999818ATATTCAGATTCATATTGATAATCDesign primers
1242683ATACCAATCCCAATAGCAAGACCADesign primers
1454123ATTACAACACCTTACAACGCTTAACAACACDesign primers
1654345AGTTGAAGATGAAGTTGAAGTAGADesign primers
1776549TCTTCCTCTTGCTCTACCTCTTCCDesign primers
1993199TTTCCATTCCTTTCTTTTCTTCTCCDesign primers

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