This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 207303 | ACAGGG-ACAGGG-ACAGGG-ACAGGG | Design primers |
| 910165 | AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT | Design primers |
| 1168763 | GCTACTGTT-GCTACTGTT-GCTACTGTT-GCTACTGTT-GCTACTGTT | Design primers |
| 1311213 | ATCGTAAGA-ATCGTAAGA-ATCGTAAGA-ATCGTAAGA | Design primers |
| 1441958 | GCCACC-GCCACC-GCCACC-GCCACC-GCCACC | Design primers |
| 2079919 | ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT-ACTGAAGCT | Design primers |
| 2317826 | GTGTGAATC-GTGTGAATC-GTGTGAATC-GTGTGAATC-GTGTGAATC-GTGTGAATC-GTGTGAATC-GTGTGAATC-GTGTGAATC-GTGTGAATC | Design primers |
| 2862929 | TCATTT-TCATTT-TCATTT-TCATTT-TCATTT-TCATTT | Design primers |
| 3260250 | ACATTTTCG-ACATTTTCG-ACATTTTCG | Design primers |
| 3809701 | AGTGAACAGT-AGTGAACAGT-AGTGAACAGT | Design primers |
| 4528019 | GGTGCCGGGTCTGGCTGT-GGTGCCGGGTCTGGCTGT-GGTGCCGGGTCTGGCTGT-GGTGCCGGGTCTGGCTGT-GGTGCCGGGTCTGGCTGT-GGTGCCGGGTCTGGCTGT | Design primers |
| 4531977 | TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG | Design primers |
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