This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 278780 | AAGCTGAAGCGAAGC-AAGCTGAAGCGAAGC-AAGCTGAAGCGAAGC-A | Design primers |
| 327761 | AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT | Design primers |
| 327825 | GCCTCTC-GCCTCTC-GCCTCTC-GCCTCTC-GCCTCTC-GCCTCTC-GCCTCTC-GCCTCTC-GCCTCTC-GCCT | Design primers |
| 817350 | CCTGTGGC-CCTGTGGC-CCTGTGGC-CCTGTGGC | Design primers |
| 1172283 | CTGAATCGGACGGGA-CTGAATCGGACGGGA-CTGAATCGGACGGGA-CTGAATCGGACGGGA-CTGAATCGGACGGGA-CTGAATCGGACGGGA-CTG | Design primers |
| 1182377 | CGAGCA-CGAGCA-CGAGCA-CGAGCA-CGAGC | Design primers |
| 2803303 | GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCCT-GAGTCC | Design primers |
| 2803415 | TGAGTCCC-TGAGTCCC-TGAGTCCC-TGAGTCCC-TG | Design primers |
| 2803450 | GCCCCTGT-GCCCCTGT-GCCCCTGT-GCCCCTG | Design primers |
| 3220866 | CCCATGCCGCCG-CCCATGCCGCCG-CCCATGCCGCCG-CC | Design primers |
| 4291703 | TTCTAGC-TTCTAGC-TTCTAGC-TTCTAGC-TTCTAGC-TTCTAGC-T | Design primers |
| 4291747 | CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTGGCTA-CTG | Design primers |
| 4291849 | GGCTCTGT-GGCTCTGT-GGCTCTGT-GGCTCT | Design primers |
| 4371756 | GTCGCAAAC-GTCGCAAAC-GTCGCAAAC | Design primers |
| 4610756 | GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-G | Design primers |
| 4610961 | CACGAG-CACGAG-CACGAG-CACGAG-CACGAG-CACGAG-CA | Design primers |
| 4611012 | GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCAA-GAGCA | Design primers |
| 4630242 | CGAGCAAT-CGAGCAAT-CGAGCAAT-CGAGCAAT-CGAGCAAT-CGAGCAAT-CGAGCAAT-CGAGCAAT-CGAGCA | Design primers |
| 4630313 | GAGCAC-GAGCAC-GAGCAC-GAGCAC-GAG | Design primers |
| 4704622 | CCGGGAGGTTTGCCGCCA-CCGGGAGGTTTGCCGCCA-CCGGGAGGTTTGCCGCCA-CCGGGAGG | Design primers |
| 4790612 | TAGCCAC-TAGCCAC-TAGCCAC-TAGC | Design primers |
| 4790638 | CCTAGCT-CCTAGCT-CCTAGCT-CCTAGCT-CCTAGCT-CCT | Design primers |
| 4790691 | GCTCCTA-GCTCCTA-GCTCCTA-GCTCCTA-GCTCCT | Design primers |
| 4790726 | GCTCCTC-GCTCCTC-GCTCCTC-GCTCCTC-GCTCCTC-GCTCCTC-GCTCCTC-GCTCCTC-GCTCCTC-GCTCCTC-GC | Design primers |
| 4790799 | ACTCGCA-ACTCGCA-ACTCGCA-ACTCGCA-ACTCGCA-ACTCGCA-ACTCGCA-ACTCGCA-ACTCGCA-ACTCGCA-ACTC | Design primers |
| 4862178 | CCCTGTGC-CCCTGTGC-CCCTGTGC-CCCT | Design primers |
| 5043093 | CCTAGCT-CCTAGCT-CCTAGCT-CCTAGCT-C | Design primers |
| 5807245 | GAGCTGAC-GAGCTGAC-GAGCTGAC-GAGCTGAC-GAGCTGAC-GAGC | Design primers |
| 5807297 | ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAG | Design primers |
| 5807990 | GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GAACTGAC-GA | Design primers |
| 5808208 | GAAGCTA-GAAGCTA-GAAGCTA-GAAGCTA-GAAGCTA-GAAGCTA-GAAGCTA-GAAGCTA-GAAGCTA-GAAGCT | Design primers |
| 6089377 | AGCAAATGA-AGCAAATGA-AGCAAATGA-AGCAAATGA | Design primers |
| 6380829 | AGGCGGAACACA-AGGCGGAACACA-AGGCGGAACACA-AGGCGGAACACA-AGGCGGAACACA-AGGCGGAACACA-AGGCGGAACACA-AGGCGGA | Design primers |
| 6726223 | CGAGCA-CGAGCA-CGAGCA-CGAGCA-CGAGCA-CGAGCA-CGAGCA-CGAGC | Design primers |
| 6726271 | AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AG | Design primers |
| 6875935 | CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCTT-CTAGCT | Design primers |
| 6876173 | GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GT | Design primers |
| 6919601 | ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC-ACGAGC | Design primers |
| 6919734 | AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT-AGAAGCT | Design primers |
| 6972687 | TGTATAAGGTTGGCTG-TGTATAAGGTTGGCTG-TGTATAAGGTTGGCTG-TGTA | Design primers |
| 6987179 | AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTCT-AGCTTC | Design primers |
| 6987235 | TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCTTCG-TGCT | Design primers |
| 6987394 | GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GTGCTC-GT | Design primers |
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