Microsatellites /Tandem Repeats database

Genome: Corynebacterium glutamicum ATCC 13032 Kitasato

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
28133GGACTGTTTAAGACTGTTTAGGACTGTTTAGGACDesign primers
297451GGGCGCACCCC-AGGCGCACCCC-AGGCGCACCCCDesign primers
411700CTTCCGGAA-CTTCCGGAA-CTTCCGGAA-CDesign primers
417435CCCATAAA-CCCATAAA-CCCATAAA-CCDesign primers
728631CCTTATTGAAT-TCTTATTGAAT-TCTTATTGAATDesign primers
962596AATGCAGTTATGTCAC-AAAGCAGTTATGTCAC-AAAGCAGTTATGTCAC-AADesign primers
1265618ACTCAGGGCCAA-GCTCAGGGCCAA-GCTCAGGGCCAADesign primers
1680281TGTGCTTTAAGGC-TGTGCTTTAAGGC-TGTGCTTTAAAGC-TDesign primers
1800448CTGCACCTG-TTGCACCTG-TTGCACCTG-TTGCACCTG-TTGCACCTG-TTGCACCTGDesign primers
1937491TGCATCGTC-TGCATCGTC-TGCATCGTC-TGCADesign primers
2071662TTGCCTAAACCAGCGTTG-CTGCCTAAACCAGCGTTG-CTGCCTAAACCAGCGTTGDesign primers
2174910TGCTGGTTCCTCTGCTAC-TGCAGGTTCCTCTGCTAC-TGCAGGTTCCTCTGCTAC-TGCDesign primers
2340271AAGGAAGAGCCAAAGAAGGAAGAGCCCAAGAAGGAAGAGCCCAAGAAGGAAGDesign primers
2598663TCTTTG-TCTTTG-TCTTTG-TCTTTGDesign primers
2642538GCTGGGGTT-GCTGGGGTT-GCTGGGGTTDesign primers
2995584AATGATGAG-AATGATGAG-AATGATGAG-AADesign primers
3075500TTTTGGTGTGGC-CTTTGGTGTGGC-CTTTGGTGTGGC-TDesign primers
3128537CACGAAGGC-CACGAAGGC-CACGAAGGCDesign primers

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