Microsatellites /Tandem Repeats database

Genome: Streptococcus thermophilus MN-ZLW-002

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
122343AGAAGAAGAAGTAAAAGAAGAGGADesign primers
224632TGTAGA-AGTAGA-AGTAGA-AGTAGADesign primers
310652AAGTTCCGCCACCATTTCCGCCACCATTTCCGCCACDesign primers
418554ATCAGAAGCTGCATCAGAAGCTGTATCAGAAGCACCDesign primers
791778CCTTAACTGATGAAGGATTAGCTGATGAAGGATTAGCTGATGAAGDesign primers
912816TTTTATTTTTATATTTTTTTACTTDesign primers
988840AGATGCACAACATGCACAACATGCACADesign primers
1272081GCCTTTTTGCCATTTTGCCTTTATDesign primers
1393285TTTCGG-CTTCGG-CTTCGG-CTTCGGDesign primers
1402374CATTTTAACT-CCTATTAACT-CCTATTAACT-CCTATTAACT-CCTATTAACTDesign primers
1473809TTGACTTTTTTTGACCTTTATTGTATTTTTDesign primers
1664472TTGATATTTTTTTATATTTATTTTTATTTTDesign primers
1684278AGGTGGTACAGTTCCTTGGGCTGCTATTTCAGACAGTTCCTTGGGCTGCTATTTCAGACAGTTCCTTGGGCTGCTDesign primers

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