This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 70458 | AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG | Design primers |
| 136657 | TAAATACT-TAAATACT-TAAATACT-TAAATACT-TAAATACT-TAAATACT-TAAATACT-TAAATACT-TAAATACT-TAAATACT-TAAATACT | Design primers |
| 137670 | ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT | Design primers |
| 232724 | TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA-TGTTTGAA | Design primers |
| 247141 | GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA-GA | Design primers |
| 322766 | GTATTGTT-GTATTGTT-GTATTGTT-GTATTGTT-GTATTGTT-GTATTGTT-GTATTGTT-GTATTGTT | Design primers |
| 347922 | TCTTATATC-TCTTATATC-TCTTATATC-TCTTATATC-TCTTATATC | Design primers |
| 347968 | CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT-CTTATATCT | Design primers |
| 348036 | ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT-ATCTCTTAT | Design primers |
| 370027 | TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 390037 | TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 405341 | AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT-AAATACCT | Design primers |
| 415627 | TAGACT-TAGACT-TAGACT-TAGACT-TAGACT-TAGACT | Design primers |
| 417593 | TAGACT-TAGACT-TAGACT-TAGACT | Design primers |
| 470485 | TTATATG-TTATATG-TTATATG-TTATATG-TTATATG | Design primers |
| 507379 | AGGTAG-AGGTAG-AGGTAG-AGGTAG-AGGTAG-AGGTAG-AGGTAG | Design primers |
| 529911 | AATTAAACTTA-AATTAAACTTA-AATTAAACTTA-AATTAAACTTA | Design primers |
| 541554 | TTTGTTAGTATCATAC-TTTGTTAGTATCATAC-TTTGTTAGTATCATAC-TTTGTTAGTATCATAC-TTTGTTAGTATCATAC-TTTGTTAGTATCATAC-TTTGTTAGTATCATAC | Design primers |
| 602424 | GTTTGGTTTTA-GTTTGGTTTTA-GTTTGGTTTTA-GTTTGGTTTTA-GTTTGGTTTTA-GTTTGGTTTTA-GTTTGGTTTTA | Design primers |
| 602615 | TTAGAGTGTGTTTA-TTAGAGTGTGTTTA-TTAGAGTGTGTTTA-TTAGAGTGTGTTTA-TTAGAGTGTGTTTA | Design primers |
| 639053 | AAAGTTATG-AAAGTTATG-AAAGTTATG-AAAGTTATG | Design primers |
| 666358 | TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC | Design primers |
| 687020 | TATCCT-TATCCT-TATCCT-TATCCT-TATCCT | Design primers |
| 799857 | TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT-TT | Design primers |
| 958255 | TATGTG-TATGTG-TATGTG-TATGTG-TATGTG-TATGTG-TATGTG | Design primers |
| 1048344 | AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT | Design primers |
| 1081690 | CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT | Design primers |
| 1185171 | CTGAATTG-CTGAATTG-CTGAATTG-CTGAATTG-CTGAATTG-CTGAATTG-CTGAATTG-CTGAATTG | Design primers |
| 1202326 | TGGCTGAA-TGGCTGAA-TGGCTGAA-TGGCTGAA-TGGCTGAA-TGGCTGAA-TGGCTGAA-TGGCTGAA-TGGCTGAA-TGGCTGAA | Design primers |
| 1248340 | CAAATTCTTTATTTTCTTCAT-CAAATTCTTTATTTTCTTCAT-CAAATTCTTTATTTTCTTCAT | Design primers |
| 1295001 | ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA-ATGTAA | Design primers |
| 1323534 | CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA-CATTTA | Design primers |
| 1445106 | TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTG | Design primers |
| 1503183 | ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT-ACTTCTTTTTTAGCT | Design primers |
| 1583689 | TATTTCTTAATA-TATTTCTTAATA-TATTTCTTAATA-TATTTCTTAATA | Design primers |
| 1633996 | ATCTTATAGA-ATCTTATAGA-ATCTTATAGA | Design primers |
| 1637074 | AAACAAG-AAACAAG-AAACAAG-AAACAAG-AAACAAG-AAACAAG-AAACAAG-AAACAAG-AAACAAG-AAACAAG | Design primers |
| 1640901 | ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG-ATTAGATTAGAG | Design primers |
| 1668222 | AGATTTATAGTCTTA-AGATTTATAGTCTTA-AGATTTATAGTCTTA-AGATTTATAGTCTTA-AGATTTATAGTCTTA-AGATTTATAGTCTTA | Design primers |
| 1823852 | CATCGCCCC-CATCGCCCC-CATCGCCCC | Design primers |
| 1835456 | AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA-AGAGATATA | Design primers |
| 1866186 | TTTTAAGTTCTG-TTTTAAGTTCTG-TTTTAAGTTCTG | Design primers |
| 1912810 | TATTTAGA-TATTTAGA-TATTTAGA-TATTTAGA-TATTTAGA-TATTTAGA | Design primers |
| 1947418 | GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC-GATTAGC | Design primers |
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