This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 423069 | TTCCTAATAA-TTCCTAATAA-TTCCTAATAA | Design primers |
| 1283617 | ATGTTGAAG-ATGTTGAAG-ATGTTGAAG-ATGTTGAAG-ATGTTGAAG-ATGTTGAAG-ATGTTGAAG-ATGTTGAAG-ATGTTGAAG-ATGTTGAAG | Design primers |
| 1850832 | AACAGCAG-AACAGCAG-AACAGCAG-AACAGCAG | Design primers |
| 2422690 | GCGGCATTTA-GCGGCATTTA-GCGGCATTTA | Design primers |
| 2526245 | TATCTT-TATCTT-TATCTT-TATCTT | Design primers |
| 3243575 | TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC | Design primers |
| 3253118 | GGATTTGGGTTG-GGATTTGGGTTG-GGATTTGGGTTG | Design primers |
| 5088270 | CAGAAGTTAAATAATCTA-CAGAAGTTAAATAATCTA-CAGAAGTTAAATAATCTA | Design primers |
| 5088342 | CAGGAGTTAAATAATTCG-CAGGAGTTAAATAATTCG-CAGGAGTTAAATAATTCG-CAGGAGTTAAATAATTCG-CAGGAGTTAAATAATTCG-CAGGAGTTAAATAATTCG | Design primers |
| 5113853 | GCAGGA-GCAGGA-GCAGGA-GCAGGA-GCAGGA-GCAGGA-GCAGGA-GCAGGA-GCAGGA | Design primers |
| 5190210 | TTCCAGGTA-TTCCAGGTA-TTCCAGGTA-TTCCAGGTA-TTCCAGGTA-TTCCAGGTA | Design primers |
| 5191386 | TATCTT-TATCTT-TATCTT-TATCTT | Design primers |
|
Please help us improve this resource by reporting problems, suggestions etc.