This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 338971 | ATTATGATGATTTGAGGGTTA-ATTATGATGATTTGAGGGTTA-ATTATGATGATTTGAGGGTTA-ATTATGATGATTTGAGGGTTA-ATTATGATGATTTGAGGGTTA-ATTATGATGATTTGAGGGTTA | Design primers |
| 390927 | GAATGATT-GAATGATT-GAATGATT | Design primers |
| 390992 | ATGATTGG-ATGATTGG-ATGATTGG-ATGATTGG-ATGATTGG-ATGATTGG | Design primers |
| 391111 | AATGATATGTTTTAATGA-AATGATATGTTTTAATGA-AATGATATGTTTTAATGA-AATGATATGTTTTAATGA | Design primers |
| 479332 | CATGCAAAGTTT-CATGCAAAGTTT-CATGCAAAGTTT | Design primers |
| 487185 | CTTTTTTTTTTGAACT-CTTTTTTTTTTGAACT-CTTTTTTTTTTGAACT | Design primers |
| 487237 | TTTTTTGAACTCTTTC-TTTTTTGAACTCTTTC-TTTTTTGAACTCTTTC-TTTTTTGAACTCTTTC-TTTTTTGAACTCTTTC | Design primers |
| 600041 | TTGGCGGAG-TTGGCGGAG-TTGGCGGAG-TTGGCGGAG | Design primers |
| 648700 | AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG | Design primers |
| 823975 | TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG | Design primers |
| 834028 | TTAAATTGTCTA-TTAAATTGTCTA-TTAAATTGTCTA-TTAAATTGTCTA-TTAAATTGTCTA-TTAAATTGTCTA-TTAAATTGTCTA-TTAAATTGTCTA | Design primers |
| 841295 | TTAAAATTATC-TTAAAATTATC-TTAAAATTATC | Design primers |
| 878658 | TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG | Design primers |
| 1003093 | GTGGTGTGATATAGAA-GTGGTGTGATATAGAA-GTGGTGTGATATAGAA-GTGGTGTGATATAGAA | Design primers |
| 1053816 | AGAAACCCCACA-AGAAACCCCACA-AGAAACCCCACA | Design primers |
| 1318903 | TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT | Design primers |
| 1366043 | GAATAAAGAATAAAA-GAATAAAGAATAAAA-GAATAAAGAATAAAA-GAATAAAGAATAAAA | Design primers |
| 1366104 | AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG-AATAAAAG | Design primers |
| 1371138 | TAAAACATATCATTTCAT-TAAAACATATCATTTCAT-TAAAACATATCATTTCAT-TAAAACATATCATTTCAT | Design primers |
| 1371292 | CATCCAAT-CATCCAAT-CATCCAAT-CATCCAAT-CATCCAAT-CATCCAAT | Design primers |
| 1371383 | CAATCATT-CAATCATT-CAATCATT | Design primers |
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