Microsatellites /Tandem Repeats database

Genome: Acetobacterium woodii DSM 1030

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
260203CAGAGCTTGATGAATCAGAACTTGATGAATCAGAACTTGATGAATDesign primers
554918TCAAGCTACCCC-CCAAGCTACCCC-CCAAGCTACCCC-CCAAGCTACCCCDesign primers
831055GCAGTCGAAACACCG-GCAGTCGAAACACCG-GCAGTCGAAACATCG-ACAGTCGAAACACCG-GCAGTTGAAACACCG-GCAGTTGAAACACCGDesign primers
1198425AAGAAGAAC-AAGAAGAAC-AAGAAGAAC-AAGAAGAAC-AAGAAGAACDesign primers
1272626ATTTTTGTCGCA-CTTTTTGTCGCA-CTTTTTGTCGCADesign primers
1435101TATCGGGAGCAGTATCGGTATCGGGAGCAGTACCGG-TATCGGGAGCAATATCGGTATCGGGAGCAGTACCGG-TATCGGGAGCAATATCGGTATCGGGAGCAATATCGG-TATCGGGAGCAATATCGGDesign primers
1674084CGAAAAAAATAT-AGAAAAAAATAT-AGAAAAAAATATDesign primers
2490507CTGTTACTGGTT-GTGTTACTGGTT-GTGTTACTGGTTDesign primers
2938303TGAACTGGTGCTTGTTGAACTGGTGCTTGCTGAACTGGAGCTTGTDesign primers
3018928TCTGCCTTGGCTTTTGCTTCGGCCTCTGCCTTGGCTTTCGCTTCGGCCGCTGCCTTAGCTTTTGCTTCGGCCDesign primers
3389916TTCGTGTTA-TTCGTGTTA-TTCGTGTTADesign primers
3567851CGTATGACACAAGTATGACACAGGTATGACACADesign primers
3609111TGAGACATGGG-CGAGACATGGG-CGAGACATGGGDesign primers
3798419GGTTTTTATT-TGTTTTTATT-TGTTTTTATTDesign primers
3973034CGTATGACACAAGTATGACACAGGTATGACACADesign primers
4001743TATCTGTGTTTACATCTGTGTTTATATCTGTGTTTADesign primers

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