Microsatellites /Tandem Repeats database

Genome: Bacillus anthracis CI

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
207532TAATTATAACTAAATATAACTAAATATAACDesign primers
291507TCTAAGTGC-TCTAAGTGC-TCTAAGTGCDesign primers
588144TGCCAATACT-TGCAAATACT-TGCAAATACT-TGCAAATACTDesign primers
865025TGCGCTGATATATTTTGAAA-ATCGCTGATATATTTTGAAA-ATCGCTGATATATTTTGAAADesign primers
927122AATAAAGAA-AATAAAGAA-AATAAAGAADesign primers
2225459TTGTTAG-TTGTTAG-TTGTTAG-TTGTTAGDesign primers
2252249CAACAGGAG-CAACAGGAG-CAACAGGAGDesign primers
2304317TCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGG-CCCAGTCGGDesign primers
2594451CCTTTT-CCTTTT-CCTTTT-CCTTTTDesign primers
2633731TTCATTTATT-TCCATTTATT-TCCATTTATT-TCCATTTATTDesign primers
2662392CAATCTTCTTTTTTTGGCTCACAATCCTCTTTTTTTGGTTCACAATCCTCTTTTTTTGGTTCADesign primers
2935346CCTTGCCAACCACCGTGTCCG-CCCGGCCAACCACCGTGTCCG-CCTTGCCAACCACCGTGTCCA-CCTTGCCAACCACCGTGTCCA-CCTTGCCAACCACCGTGTCCA-CCTTGCCAACCACCGTGTCCADesign primers
3455064GTAGTAATGCTGGTAGTACTGCTGGTAGTACTGCTGDesign primers
3804957AACATTTTTTGAACATTTATTGAACTTTTTTTGDesign primers
3810237ACAAAGATA-ACAAAGATA-ACAAAGATADesign primers
4129009ATACAT-ATACAT-ATACAT-ATACATDesign primers
4453676GTGTTTCCC-GTGTTTCCC-GTGTTTCCCDesign primers
4463704TGTTGGTGC-TGTTGGTGC-TGTTGGTGCDesign primers
4537394AAGGTATAGAACAAGGTATAGAGCAAGGTATAGAACAAGGTATAGAACDesign primers
4883930AAACAAGACAAACAGGAT-AAACAAGACAAGCAGGAT-AAACAAGACAAGCAGGAT-AAACAAGACAAGCAGGATDesign primers

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