Microsatellites /Tandem Repeats database

Genome: Kosmotoga olearia TBF 19.5.1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
226273GTTGTAGGTTGTGGGTTGTAGGTTGTAGDesign primers
261980GTTGTGGGTTGTCGGTTGTAGGTTGTGCDesign primers
475422GGGTTTAGGGTATAGAGTTTAAGGTTTADesign primers
564133GCACAAAAGCAGAAAAGCAAAAAADesign primers
665357ACTTCCACTTTCCCTTCCACCTCCDesign primers
717914GAATCATAAGAATCACAAGAACCATAADesign primers
979594AA-GA-AA-CA-GA-AA-GA-GA-AA-TA-GA-AADesign primers
1061457TTCTCTGGTTCCCTGGTTCTCCGGDesign primers
1180924TATATATAGATATATGTACATATADesign primers
1211104CGAGATGGCGAGAAGGCGAGAAGGDesign primers
1281877CACAACCTACAACCGACAACCCACAACGDesign primers
1301706TTCTCGGACTCTCGGATTCTCGTADesign primers
1308336TTCTCGGACTCTCGGATTCTCGTADesign primers
1325420ATACCCTATACCCCAGACCCTATACCCGDesign primers
1334287TCTCGGTTCTCGGATTTCGGTTCTCGGCDesign primers
1334606TTCTCGGACTCTCGGATTCTCGGADesign primers
1335390GGTTCTCGGATTCTCGGATTCTCGDesign primers
1337080TTCTCGGA-CTCTCGGA-CTCTCGGA-TTCTCGGADesign primers
1340215TTCTCGGACTCTCGGATTCTCGGADesign primers
1341562TTCTCGGACTCTCGGATTCTCGGADesign primers
1387555AGAATCCG-AGAATCCG-AGAGTCCGDesign primers
1392688AATCCGAG-AATCCGAG-AGTCCGAG-AGTCCGAGDesign primers
1392794AAATCCGA-GAATCCGA-GAATCCGADesign primers
1392902AAGCCGAGAATCCGAGAATCCGAGDesign primers
1395340AAATGTATGTTATAATGTATGTGAATATGTATGTTGDesign primers
1403626AAATCCGA-GAATCCGA-GAATCCGADesign primers
1405087CCGAGAATCCGAGAGTCCGAGAATCCGAGAACDesign primers
1405212AATCCGAG-AATCCGAG-AGTCCGAG-AGTCCGAGDesign primers
1405274CGAGAATCCGAGAGTCCGAGAACCDesign primers
1418308ATCCGAGA-ATCCGAGA-GTCCGAGA-GTCCGAGADesign primers
1429332AAGCCGAGAATCCGAGAATCCGAGDesign primers
1449453ATCCGAGA-ATCCGAGA-ATTCGAGA-GTCCGAGADesign primers
1496861TTCTTCTTCCTCTACTTCTTTTTCDesign primers
1503170CTCTCGGATTCTCGGACTCTCGGADesign primers
1756863GAAAGAAGGAGAAAACAGGAGAAAGATGCADesign primers
1758265TTCTCGGA-CTCTCGGA-CTCTCGGA-CTCTCGGADesign primers
1775677CGAGATGGCGAGAAGGCGAGAAGGDesign primers
1787087TCTTTTCCTTTTGCTTTTTCTTTCDesign primers
1959511TCTCGGTCTCTCGGTTTCTCGGACDesign primers
2059061AAGAGGAAGAAGAAAAGGAAGAAGDesign primers

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