Microsatellites /Tandem Repeats database

Genome: Burkholderia phymatum STM815

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
145960GCCGATACC-GCCGATACC-GCCGATACC-GCCGATACCDesign primers
230608CGATTGAGT-CGATTGAGT-CGATTGAGTDesign primers
578157ACCACGCAGATACCACGCGGATACTACGCAGATDesign primers
916746GGTTCGACGACC-GGCTCGACGACC-GGCTCGACGACC-GGCTCGACGACCDesign primers
949955GCCGCGAATCAGGCCGCGAGTCAGGCCGCGAAGCAGDesign primers
1013235TGCCGCAGT-TGCCGCAGT-TGCCGCAGTDesign primers
1091316AAGGAAACAAC-GAGGAAACAAC-GAGGAAACAACDesign primers
1107126CCGCTCCGACCAG-ACGCTCCGACCAG-ACGCTCCGACCAGDesign primers
1182602CTCGTTAAACCCACGTTAAACCCTCGTTAAACCDesign primers
1382516GCCGCAGCG-GGCGCAGCG-GGCGCAGCG-GGCGCAGCG-GGCGCAGCG-GGCGCAGCGDesign primers
1519231CATTCGCTCGCATT-CATTCGCCCGCATT-CATTCGCCCGCATT-CATTCGCCCGCATTDesign primers
1581182GCTTCTGTTGCTGTTCGA-GCTGCTGTTGCTGTTCGA-GCTGCTGTTGCTGTTCGA-GCTGCTGTTGCTGTTCGADesign primers
1718744GATTCGCCGCA-TATTCGCCGCA-TATTCGCCGCADesign primers
1848661GCTCAATGTGCC-GCTCATTGTGCC-GCTCATTGTGCC-GCTCAATGTGCCDesign primers
1883393CCGTCA-CAGTCA-CAGTCA-CAGTCA-CAGTCA-CAGTCADesign primers
1901674CCCTCGCCGC-GCCTCGCCGC-GCCTCGCCGCDesign primers
1902041TCGCACCGTCTC-GCGCACCGTCTC-GCGCACCGTCTCDesign primers
1919671TGCTTATGCCTCTGCTTGTGCCTCTGCTTATGCCTGDesign primers
1925386CTCGTGCCGTCTTGTGCCGTCTCGTGCCGTCTCGTGCCGCDesign primers
1948465TCGCGTGGA-TCGCGTGGA-TCGCGTGGADesign primers
1949118CGGCGCCCTGCATCGTCGCCCTGCATCGTCGCCCTGCATDesign primers
2091430TGAGTGTCACTGAGTGTCAGTGAGCGTCACDesign primers
2470574ACGGGATCGCC-GCGGGATCGCC-GCGGGATCGCC-GCGGGATCGCCDesign primers
2496479TGTGCCGCTTCATCTGCCGCTTCATCTGCCGCTTCADesign primers
2535097TCATGA-CCATGA-CCATGA-CCATGA-CCATGA-CCATGADesign primers
2707440CCGCTTCGATCCCTGCTTCGATCCCTGCTTCGATCCDesign primers
2707477TGCTTCGATCAT-TGCTTCGATCAT-TGCTTCGATCACDesign primers
3310857TTTTTGGTTTTGGTTTTGGTTTTGCTTTTGGTTTTGDesign primers
3311555AAAGCAAAAGCAGAAGCAAAAGCAAAAGCAGAAGCAAAAGCAAAACCADesign primers
3368590AGACAGACACCGGACAGACACCAGACAGACACGDesign primers

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