Microsatellites /Tandem Repeats database

Genome: Mycobacterium sp. KMS

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
76437GAACCCGTCGAG-CAACCCGTCGAG-CAACCCGTCGAGDesign primers
150386CCGAGC-CCGAGC-CCGAGC-CCGAGCDesign primers
198828TCCCCGGCTGAGTCACGCGCCGGCCCGCCGGCTGAGTCACGCGCCGGCCCGCCGGCTGAGTCACGCGCCGGCDesign primers
463241GAACCGGTTGTCGAAGAACCGGTCGTCGAAGAACCGGTCGTCGAADesign primers
487503CGGCTCAGGGTCTGGCTCAGGGTCCGGCTCCGGGTCDesign primers
515511CCGGGC-CCGGGC-CCGGGC-CCGGGCDesign primers
749859GACAAGGCCAAAGACAAGGCCGAAGACAAGGCCGAADesign primers
991230GCGGGGAAAAGGCGGGGAAAGGGCGGGGAAAGGDesign primers
1608447AGTCGA-TGTCGA-TGTCGA-TGTCGA-TGTCGA-TGTCGADesign primers
1775655CTCGCC-CTCGCC-CTCGCC-CTCGCCDesign primers
2389719CGAGATCCTCCTCGCCGAGATCCTCCTCACCGAGCTCCTCCTCGCDesign primers
2394670GAGGTCGGC-GAGGTCGGC-GAGGTCGGCDesign primers
2428620TGGCCGACCGGGACCACACGCTCACCGACCGGGACCACACGCTGACCGACCGGGACCACACGGDesign primers
2428725CGGCCCAGACCGGTCCGCAGCCGA-TGGCCCAGACCGGTCCGCAGCCGA-TGGCCCAGACCGGGCCGCAGCCGADesign primers
2983945GAGTATGCCGACGAGTACGCCGACGAGTACGCCGACDesign primers
3094273GTGTCCGTT-GTGTCCGTT-GTGTCCGTTDesign primers
3215005AACGGACAC-AACGGACAC-AACGGACACDesign primers
3229656TGCGGCGCAGGCTGGGGCGCAGGCTGGGGCGCAGGCDesign primers
3446841ACGTCGGTC-ACGTCGGTC-ACGTCGGTC-ACGTCGGTCDesign primers
3489199CGCGGGAGCGGC-AGCGGGAGCGGC-AGCGGGAGCGGC-AGCGGGAGCGGC-AGCGGGAGCGGCDesign primers
3489260GCGGGAGCCGGC-GCGGGAGCCGGC-GCGGGAGCCGGC-GCGGGAGCGGGCDesign primers
3489387CCTGCGGGAGCGCGG-TCTGCGGGAGCGCGG-TCTGCGGGAGCGCGGDesign primers
3547578TCGACGTTTAGTCGGCTCGCCGAC-GCGACGTTTAGTCGGCTCGCCGAC-GCGACGTCTAGTCGGCTCGCCGACDesign primers
3756423CGTTTCCCAACGTTTCCCAGCGTTTCCGAADesign primers
3777621CGTTTCCCAACGTTTCCCAGCGTTTCCGAADesign primers
3812411TCCTCGTCAGAATCCTCGTCCTCGTCGGAATCCTCGTCCTCGTCGGAATCCTCGDesign primers
3924511CCGTTGCCG-CCGTTGCCG-CCGTTGCCGDesign primers
3924544CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
3924590CGCCGTTGC-CGCCGTTGC-CGCCGTTGCDesign primers
4180166AGCCTTCACCTCGGG-GGCCTTCACCTCGGG-GGCCTTCACCTCGGGDesign primers
4632814TGGGGGCACTGTCGTTGGGGGGACTGTCGTTGGGGGCACTGTCGTDesign primers
4665424TCGCGCCGGTGGCGCCAAGGGAGT-CAGCGCCGGTGGCGCCAAGGGAGT-CAGCGCCGGTGGCGCCAAGGGAGTDesign primers
4798134GCCCCG-GCCCCG-GCCCCG-GCCCCGDesign primers
4987496TCA-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCA-TCG-TCG-TCADesign primers
4987552GTCATC-GTCATC-GTCATC-GTCATCDesign primers
4987583TCATCG-TCATCG-TCATCG-TCATCGDesign primers
4987608CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGTDesign primers
4987679TCGTCATCG-TCGTCATCG-TCGTCATCG-TCGTCATCGDesign primers
4987757TCATCG-TCATCG-TCGTCG-TCGTCG-TCATCG-TCATCG-TCATCG-TCATCG-TCATCG-TCATCG-TCATCG-TCATCGDesign primers
5337177AACCCG-AACCCG-AACCCG-AACCCGDesign primers
5361109CCCGGCCTGACCACGCCCGGTCTGACCACGCCCGGCCTGACCACGDesign primers
5582082CCACGA-CCACGA-CCACGA-CCACGADesign primers
5722507TTGCCGTTGCCGTTGCCCTTGCCGTTGCCGTTGCCCDesign primers

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