Microsatellites /Tandem Repeats database

Genome: Mycobacterium sp. KMS

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
76438AACCCGTCGAGC-AACCCGTCGAGC-AACCCGTCGAGCDesign primers
150386CCGAGC-CCGAGC-CCGAGC-CCGAGCDesign primers
198831CCGGCTGAGTCACGCGCCGGCCCG-CCGGCTGAGTCACGCGCCGGCCCG-CCGGCTGAGTCACGCGCCGGCCCGDesign primers
463250GTCGAAGAACCGGTC-GTCGAAGAACCGGTC-GTCGAAGAACCGGTCDesign primers
515511CCGGGC-CCGGGC-CCGGGC-CCGGGCDesign primers
749869AAGACAAGGCCG-AAGACAAGGCCG-AAGACAAGGCCGDesign primers
1608448GTCGAT-GTCGAT-GTCGAT-GTCGAT-GTCGAT-GTCGATDesign primers
1775655CTCGCC-CTCGCC-CTCGCC-CTCGCCDesign primers
2394670GAGGTCGGC-GAGGTCGGC-GAGGTCGGCDesign primers
3094273GTGTCCGTT-GTGTCCGTT-GTGTCCGTTDesign primers
3215005AACGGACAC-AACGGACAC-AACGGACACDesign primers
3229659GGCGCAGGCTGG-GGCGCAGGCTGG-GGCGCAGGCTGGDesign primers
3446841ACGTCGGTC-ACGTCGGTC-ACGTCGGTC-ACGTCGGTCDesign primers
3489200GCGGGAGCGGCA-GCGGGAGCGGCA-GCGGGAGCGGCA-GCGGGAGCGGCA-GCGGGAGCGGCADesign primers
3489261CGGGAGCCGGCG-CGGGAGCCGGCG-CGGGAGCCGGCGDesign primers
3489388CTGCGGGAGCGCGGT-CTGCGGGAGCGCGGT-CTGCGGGAGCGCGGTDesign primers
3924511CCGTTGCCG-CCGTTGCCG-CCGTTGCCGDesign primers
3924544CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
3924590CGCCGTTGC-CGCCGTTGC-CGCCGTTGCDesign primers
4180167GCCTTCACCTCGGGG-GCCTTCACCTCGGGG-GCCTTCACCTCGGGGDesign primers
4665426GCGCCGGTGGCGCCAAGGGAGTCA-GCGCCGGTGGCGCCAAGGGAGTCA-GCGCCGGTGGCGCCAAGGGAGTCADesign primers
4798134GCCCCG-GCCCCG-GCCCCG-GCCCCGDesign primers
4987551CGTCAT-CGTCAT-CGTCAT-CGTCATDesign primers
4987583TCATCG-TCATCG-TCATCG-TCATCGDesign primers
4987608CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGT-CATCATCGTDesign primers
4987679TCGTCATCG-TCGTCATCG-TCGTCATCG-TCGTCATCGDesign primers
4987778TCGTCA-TCGTCA-TCGTCA-TCGTCA-TCGTCA-TCGTCA-TCGTCA-TCGTCADesign primers
5337177AACCCG-AACCCG-AACCCG-AACCCGDesign primers
5582082CCACGA-CCACGA-CCACGA-CCACGADesign primers

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