This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 0 | TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG | Design primers |
| 6592 | TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG | Design primers |
| 128491 | TTTAACCAAATCTTTCTGTTC-TTTAACCAAATCTTTCTGTTC-TTTAACCAAATCTTTCTGTTC-TTTAACCAAATCTTTCTGTTC | Design primers |
| 130052 | TGTTCTGTCTTTTGTTTTTCT-TGTTCTGTCTTTTGTTTTTCT-TGTTCTGTCTTTTGTTTTTCT | Design primers |
| 130174 | TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC | Design primers |
| 130312 | TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC | Design primers |
| 177350 | CTCTTTAGCCTC-CTCTTTAGCCTC-CTCTTTAGCCTC | Design primers |
| 338673 | TTCTTTAACCTCTTCTTTTTCTTC-TTCTTTAACCTCTTCTTTTTCTTC-TTCTTTAACCTCTTCTTTTTCTTC-TTCTTTAACCTCTTCTTTTTCTTC | Design primers |
| 444402 | TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA | Design primers |
| 444530 | ATGGTTGA-ATGGTTGA-ATGGTTGA-ATGGTTGA | Design primers |
| 444763 | TTAAAGCTTTATTTAT-TTAAAGCTTTATTTAT-TTAAAGCTTTATTTAT-TTAAAGCTTTATTTAT-TTAAAGCTTTATTTAT | Design primers |
| 696788 | TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA-TCATAATTAACCCTCAAATCA | Design primers |
| 846257 | TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG | Design primers |
| 900539 | TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG | Design primers |
| 1382520 | TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT-TTATGTAT | Design primers |
| 1477284 | AAATAAAGCTTTAAAT-AAATAAAGCTTTAAAT-AAATAAAGCTTTAAAT-AAATAAAGCTTTAAAT-AAATAAAGCTTTAAAT | Design primers |
| 1477576 | CATTCAAC-CATTCAAC-CATTCAAC-CATTCAAC | Design primers |
| 1477651 | TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA | Design primers |
| 1508338 | CTAAGT-CTAAGT-CTAAGT-CTAAGT-CTAAGT-CTAAGT | Design primers |
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