This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
Position | Sequence | |
282287 | GCCCAT-GCCCAT-GCCCAT-GCCCAT | Design primers |
952774 | CATGGGCGG-CATGGGCGG-CATGGGCGG | Design primers |
1067021 | GTCT-GTCT-GTCT-GTCT-GTCT-GTCT | Design primers |
1070943 | CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG-CTTCGG | Design primers |
2755103 | ACCAAAGGATCCGGCGGC-ACCAAAGGATCCGGCGGC-ACCAAAGGATCCGGCGGC | Design primers |
4003084 | CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA-CCGAGA | Design primers |
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