Microsatellites /Tandem Repeats database

Genome: Exiguobacterium sp. MH3

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
13879GGA-AGA-GGA-AGT-TGA-AGA-AGA-AGA-CGA-AGADesign primers
267228ATCTCCGTGATCATCCCCGTCATCGTCTCCATGATCDesign primers
347794AAAAATGAAGAGTTGCAGGCGCAAAGTGAAGAGTTGCTCGCGCAACAAGAAGAATTGCAGGCGDesign primers
550853TAAAGCAGCGGCTGAAAAAGCAGCAGCAGAGAAAGCGGCAGCTGADesign primers
750928AAAATGAAGAATTACAAGCGCAACAGGAAGAATTGCAAGCACAGCAGGAAGAATTACAAGCACDesign primers
902789AAAAAAGTTGTACAATAGTTGTACAAAAGGTGTDesign primers
1078868AGCATAACAGTATAACAGCATAACDesign primers
1121353ATTCGATTATTCGATAGTTCGATTDesign primers
1133596CGATCATGACCACGACCATGAGCACCATCATCACCADesign primers
1423453TTTAAATGTTTAAACGTTTAAACGDesign primers
1834614GTCGGTTCGTCCGTCGTCGGCTCGTCCGTTGATGGTTCATCCGTCGTCGGCTCATCCGTCGTCGGTTCATCCGTCGTCGGTTCATCCGTCGTCGGTTCGTCCGTCGTCGGTTCGTCCGTCGTCGGTTCGTCCGTTGTCGGTTCGTCCGTTGTCGGTTCGTCCGTTDesign primers
2713102GGTGAT-GGTGAT-GATGAT-GGCGATDesign primers
2721661TTCTCTTCTTTTTTCATCTCTTCTCDesign primers
2852055CATTCCGCCCATTCCACCCATGCCGCCDesign primers
2979244TGGAGCTTG-TCCTGCTTG-TCCTGCTTG-TCCTGCTTG-TCCTGCTTG-TCCTGCTTG-TCCTGCTTG-TCCTGCTTGDesign primers

Please help us improve this resource by reporting problems, suggestions etc.