Microsatellites /Tandem Repeats database

Genome: Bifidobacterium thermophilum RBL67

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
90572GTGGCTG-GTGGCTG-GTGGCTG-GTGGCTG-GTGGCTGDesign primers
91327AAGAAGCAACAAAGAAACAACAAAGAAGCAAAADesign primers
133294GCGTGTGAT-GCGTGTGAT-GCGTGTGAT-GCGTGTGATDesign primers
148401GGTGGTGCTGCGGGTGCG-GGTGGTGCTGCGGGTGCG-GGTGGTACTGCGGGTGCGDesign primers
157860CGCCGACATTCCCCCCGACATTCCCCCCGACATTCCDesign primers
184425ACGCATTCACACACATTCACACACATTCACDesign primers
218984TGTATTGTATCATTTATTGTATCATTTATTGTATCADesign primers
292134CCGGTTCAATCCGGTTCCATTCGGTTCAATDesign primers
550055CCAGCGCAATCAAGCGCAATCAAGCGCAATDesign primers
613081ATCGTTTCCGTGTT-GTCGTTTCCGTGTT-GTCGTTTCCGTGTTDesign primers
699756GAGATGGGT-GAGATGGGT-GAGATGGGTDesign primers
705598GTCACG-GTCACG-GTCACG-GTCACGDesign primers
715765TCGTCGAAG-TCGTCGAAG-TCGTCGAAGDesign primers
716403GGCGGTGGTTCC-TGCGGTGGTTCC-TGCGGTGGTTCCDesign primers
727522CCAGAAGGATGGCAAGAAGGATGGCAAGAAGGATGGDesign primers
860355CGGATATG-CGGATATG-CGGATATGDesign primers
1694280GCGGCGGAG-GCGGCGGAG-GCGGCGGAGDesign primers
1707698TTGAACCGGCTGA-TTGAACCGGCTGA-TTGGACCGGCTGADesign primers
1714078TCGGTCGCGGTCTTGGTCGCGGTCTTGGTCGCGGTCDesign primers
1921942GCGGTAGGGCGGGGT-GCGGTAGGGCGGGGT-GCGGCAGGGCGGGGT-GCGGCAGGGCGGGGTDesign primers
1944874ACCGCGTTCATT-GCCGCGTTCATT-GCCGCGTTCATTDesign primers
1990686TCGTGGTGTCTG-TCGTGGTGTCTG-TCGTGATGTCTGDesign primers
2197040GTTCCCGATTGCC-GTTCCCGATTGCC-GTCCCCGATTGCCDesign primers
2259819GCGCCTTCGCCTTCCGCGCCGTCGCCTTCCGCGCCTTCGCCTTCCDesign primers

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