Microsatellites /Tandem Repeats database

Genome: Alcanivorax dieselolei B5

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
667791TCGTGCCA-GCGTGCCA-GCGTGCCA-GCGTGCCA-GCGTGCCA-GCGTGCCADesign primers
715111GCGTGTT-GCGTGTT-GCGTGTT-GCGTGTTDesign primers
1102462ACGCAATC-ACGCAATC-ACGCAATCDesign primers
1121664GCTGAGAGAAGGGCTGACAGAAGGGCTGACAGAAGGDesign primers
1204798GTTGCGTTGCGTTGCGTTGAGCTGCGTTGCDesign primers
1561668TATGTTG-CGTGTTG-CGTGTTG-CGTGTTG-CGTGTTG-CGTGTTG-CGTGTTG-CGTGTTG-CGTGTTGDesign primers
1626306GCTGCGT-GTTGCGT-GTTGCGT-GTTGCGT-GTTGCGT-GTTGCGTDesign primers
1626822TACACGC-AACACGC-AACACGC-AACACGC-AACACGC-AACACGCDesign primers
1651511CCTTCGTG-CCAGCGTG-CCAGCGTG-CCAGCGTG-CCAGCGTG-CCAGCGTG-CCAGCGTG-CCAGCGTG-CCAGCGTGDesign primers
2449631GGAGGCATCTTTTAG-GGAGGTATCTTTTAG-GGAGGTATCTTTTAG-GGAGGTATCTTTTAGDesign primers
2454695TTGTGCCGGCCCGGAGACGCCGGGTGGTGCCGGCCCGGAGCCGCCGGGTGGTGCCGGCCCGGAGCCGCCGGGDesign primers
2689433CGACGG-CGACGG-CGACGG-CGACGGDesign primers
2729519ACCATGGAAAGC-GCCATGGAAAGC-GCCATGGAAAGCDesign primers
2878548GCCTTGTTCGAGGCCCTGTTCGAGGCCTTGTTCGAGDesign primers
3091150CAAC-TAAC-TAAC-TAAC-TAAC-TAAC-TAAC-TAAC-TAACDesign primers
3328592GTTCTGAGTCGGCAGTTCTGAGTCGGCGGTTCTAAGTCGGCADesign primers
3445981CTTACTTGTTCG-GTTACTTGTTCG-GTTACTTGTTCGDesign primers
3648718AGCGTGTA-AGCGTGTA-AGCGTGTADesign primers
3729248AACACGCT-GACACGCT-GACACGCT-GACACGCT-GACACGCT-GACACGCTDesign primers

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