This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 32879 | ACCGCCGAACGC-ACCGCCGAACGC-ACCGCCGAAAGC | Design primers |
| 78340 | TATAAGTA-TATAAGTA-TATAAGTA | Design primers |
| 288408 | GCCAAAGCT-GCCAAAGCT-GCCAAAGCT-GCCAAAGCT | Design primers |
| 288445 | CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG | Design primers |
| 329737 | TGAA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA | Design primers |
| 378220 | ACGGGAAAATACG-ATGGGAAAATACG-ATGGGAAAATACG-ATGGGAAAATACG-ATGGGAAAATACG | Design primers |
| 466343 | GGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG | Design primers |
| 491432 | GGTAAAAAC-GGTAAAAAC-GGTAAAAAC | Design primers |
| 733905 | GGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG | Design primers |
| 736084 | GGGAATGACGAAAAGTTGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTTGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTTGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTTGC-GGGAATGACGAAAAGTGGC-GGGAATGACGAAAAGTTGC-GGGAATGACGAAAAGTTGC | Design primers |
| 874272 | TTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 915197 | CCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC | Design primers |
| 1023139 | ATTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG | Design primers |
| 1069363 | AAGAGCGTATCCGCCAAGAACGTATCCGCCAAGAGCGTATCCGTC | Design primers |
| 1125084 | TGGGAGAGGGCT-AGGGAGAGGGCT-AGGGAGAGGGCT | Design primers |
| 1148114 | TGCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA-ACCCA | Design primers |
| 1280627 | CGTCTCTACAACCCATCTCTACAACCCATCTCTACAACC | Design primers |
| 1280667 | ATCTCTACAGCCATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCCATCTCTACAGCTATCTCTACAGCCATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCTATCTCTACAGCCATCTCTACAGCCATCTCTACAGCCATCTCTACAGCCATCTCTACAGCCATCTCTACAACCATCTCTACAACC | Design primers |
| 1434866 | CCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC-TCTTC | Design primers |
| 1602679 | ATGAGAA-ATGAGAA-ATGAGAA-ATGAGAA-ATGAGAA | Design primers |
| 1717649 | GGTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG-TTTGTTG | Design primers |
| 1957532 | GGTTCGGGTATTCCTGACGATTCGGGTATTCCTGACGATTCGGGTATTCCTGAC | Design primers |
| 1957587 | ATTCAGGTATTCCTGACG-ATTCAGGTATTCCTGACG-ATTCAGGTATTCCTGACG-ATTCAGGTATTCCTGACG-ATTCAGGTATTCCTGACG-ATTCAGGTATTCCTGACG-ATTCAGGTATTCCTGACG | Design primers |
| 2000379 | AAGG-AAGG-AAGG-AAGG-AAGG-AAGG-AAGG | Design primers |
| 2095385 | GCTGCGGTTGGGGTTGCGGTTGGGGCTGCGGTTGCG | Design primers |
| 2111363 | CAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA-TAAA | Design primers |
| 2164543 | GGCTTTTTTCTGTTT-GGCTGTTTTCTGTTT-GGCTGTTTTCTGTTT-GGCTTTTTTCTGTTT-GGCTTTTTTCTGTTT | Design primers |
|
Please help us improve this resource by reporting problems, suggestions etc.