This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 13025 | AATTCAA-AATTCAA-AATTCAA-AATTCAA | Design primers |
| 251905 | AAAGTTTC-AAAGTTTC-AAAGTTTC-AAAGTTTC | Design primers |
| 252018 | ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT-ACTCTTT | Design primers |
| 724241 | CTAATTGTG-CTAATTGTG-CTAATTGTG | Design primers |
| 769437 | AACAATAATCAATA-AACAATAATCAATA-AACAATAATCAATA | Design primers |
| 875492 | ACAACACA-ACAACACA-ACAACACA | Design primers |
| 1275669 | TTCAATCTTTCC-TTCAATCTTTCC-TTCAATCTTTCC-TTCAATCTTTCC | Design primers |
| 1484130 | AAAAACTA-AAAAACTA-AAAAACTA | Design primers |
| 1915495 | TTGCTT-TTGCTT-TTGCTT-TTGCTT | Design primers |
| 2047101 | TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC-TTTACTTTTTACTC | Design primers |
| 2047353 | TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC | Design primers |
| 2047416 | TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC | Design primers |
| 2047472 | TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC-TTTACTC | Design primers |
| 2617570 | AAGTTTC-AAGTTTC-AAGTTTC-AAGTTTC-AAGTTTC | Design primers |
| 2836550 | TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA | Design primers |
| 2941875 | GGATAC-GGATAC-GGATAC-GGATAC | Design primers |
|
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