Microsatellites /Tandem Repeats database

Genome: Pyrococcus sp. NA2

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
446248ATTGTGTGTCATTATGTGTTGGTGTGTGTCDesign primers
496081CTTCTTTTTCTTCTTTTTCTTCTTCTTTTTCTCCTTDesign primers
733856GAAGAGAAGAAGGAGGAAGAGGAGAAGAAAGAAGAGGAAGAGGAGDesign primers
734187GCTGCAGCTCCAGCCGCAGCTCCADesign primers
734228AGAAGAAAAGAAGGAAGAGGAGAAGAAGGAAGAAGAGAAGGAAGADesign primers
809258CTTCTCCTTCTTTTTCTCCTTTTCDesign primers
820380AGAACAAGGACAAGAAGAAGAAAADesign primers
867247AGCATTCCTAGTATTCCTGGCATTCCTDesign primers
920644GTATAATGGCTGTTATTATAATGGTGGTTATTATAATGGCCATTADesign primers
931386GATGAGGAAGAGGATTAGGAGGAGDesign primers
945773ATGATACCTTTATGAGCCCTTTATGATACCTTTDesign primers
1044257AAGAAGAGATTAAAGAAGAGAAGAAAGAAGAGAAAADesign primers
1234678GAAAAATCTAGAAAAATCATGAAAATTTTADesign primers
1262540TTTCTTCCTTTCTTTCCTTCTTCCDesign primers
1360571CT-CT-CT-TA-GG-CT-TT-CG-TA-GG-CT-CT-CT-TT-GTDesign primers
1433527GTTGGAGGTGGAGTTGGAGTTGCADesign primers
1580492CCTCCTCTTCCCCATCCTCTGCCCCAGCCTCTTCCCCAACCTCTTCCCDesign primers

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