Microsatellites /Tandem Repeats database

Genome: Desulfomicrobium baculatum DSM 4028

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
103369TGAGGCCGGGTGAGGCCGAGTGAGGCTGGGDesign primers
213551CACTGGTGGGGT-GACTGGTGGGGT-GACTGGTGGGGTDesign primers
228880CGCGCCCGTCGCCCAGCCCGCGCCCGTCCCCCAGCCCGCGCCCGTCGCCCAGCCCGCGCCCGTCGCCCAGGCDesign primers
518522GGGGCAGGGCGGACACGT-TGGGCAGGGCGGACACGT-TGGGCAGGGCGGACACGT-TGGGCAGGGCGGACACGT-TGGGCAGGGCGGACACGT-TGGGCAGGGCGGACACGTDesign primers
662712GGAGCTTTGGGAGTGATGGGAGCTATGGGAGTGATGGGAGCTATGGGAGTGATGDesign primers
1710896ATTGGTGAG-ATTGGTGAG-ATTGGTGAGDesign primers
1741296AACGGCGGCGGCAACGGTGGCGGCAACGGTGGCGGCDesign primers
2201919AATGGAAGGCAAACTGGAAGGCAAACTGGAAGGCAADesign primers
2588129CCCCCTACCCA-TCCCCTACCCA-TCCCCTACCCADesign primers
2891914ACGCTGCCTTTA-TCGCTGCCTTTA-TCGCTGCCTTTADesign primers
2893511CTTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTG-TCTCCGTCGCTGDesign primers
2893731TGTCGCTGCCTC-TATCGCTGCCTC-TATCGCTGCCTC-TGTCGCTGCCTCDesign primers
2897650TCGCTGCCTCTG-TCGCTGCCTTTG-TCGCTGCCTTTG-TCGCTGCCTTTG-TCGCTGCCTCTA-TCGCTGCCTCTG-TCGCTGCCTCTG-TCGCTGCCTCTGDesign primers
2926287GTCGCTGCCTCCATCGCTGCCTCCATCGCTGCCTCCATCGCTGCCTCCATCGCTGCCTCCGTCGCTGCCTCCGTCGCTGCCTCCGTCGCTGCCTCCGTCGTTGCCTCCATCGCTGCCTCCGTCGTTGCCTCCGTCGTTGCCTCCGTCGTTGCCTCCGTCGCTGCCTCCGTCGCTGCCTCCGTCGCTGCCTCCATCGCTGCCTCCGTCGCTGCCTCCGTCGTTGCCTCCATCGCTGCCTCCGTCGTTGCCTCCGTCGCTGCCTCCGTCGCTGCCTCTDesign primers
2930110TCACTATTCACCAACCACTATTCACCAATCACTATTCACCAADesign primers
2931094CCTGCCTTTGCCCTGTCTTTGCCCTGCCTTTGCDesign primers
2941797GCCCTGCGTGGCCGCCCTTCTTCTACCCTGCGTGGCCACCCTTCTTCTGCCCTGCGTGGCCGCCCTTCTTCTGCCCGACGTGGCCGCCCTTCTTCTDesign primers
2944322CCATTCA-CAATTCA-CAATTCA-CAATTCA-CAATTCA-CAATTCADesign primers
2991929CATGCCGCC-CATGCCGCC-CATGCCGCCDesign primers
2996190TTGGTGCCCTTGATGCGGTTGGTGCCCTTGGTGCGGCTGGTGCCCTTGATGCGGDesign primers
3476759GCCTTGACCCGTTGACGGATGCCTTGGCCCGTTGACAGATGCCTTGACCCGTTGACAGATDesign primers
3687890AACCAAA-AACCAAA-AACCAAA-AACCAAADesign primers

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