Microsatellites /Tandem Repeats database

Genome: Thermococcus sibiricus MM 739

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
217861GTTTCAGTTTTAGTTTCGGTTACAGTTTCGDesign primers
234844AGAGTTCTATAAACTTCTATAAAGTTCTTTDesign primers
316622AAAATTAAAATAAAATTTAAAAATDesign primers
346317AATTCTTTTTAACTTCTTTTTCAATATTTTTTADesign primers
369768AGAGGAGGAAGAAGAGGAAGAGGAGAADesign primers
660247ATTTTTGTTTTTCTTTTTATTTTCDesign primers
686620ATTATTTTATTATTGTATTATTTADesign primers
688375ATTATTTTATTAATTTATTATTTADesign primers
1110972AGTTATA-AGTTAAA-AGTTAAA-CGTTATADesign primers
1248737GAGGAGGAAGAAGACTGGGAGGATGAAGACTGGGAGGAAGAAGACDesign primers
1393555AACTATGCTTATCTAGGCTTAACATTGCTTDesign primers

Please help us improve this resource by reporting problems, suggestions etc.